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OPENSEQ.org
CYOC - CYOD
UniProt: P0ABJ3 - P0ABJ6
Length: 313
Sequences: 291
Seq/Len: 0.93
I_Prob: 0.17
CYOC - Cytochrome o ubiquinol oxidase subunit 3
Paralog alert: 0.19 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: CYOC 		CYOD - Cytochrome o ubiquinol oxidase protein CyoD
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CYOD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
108_F 25_S 1.72 0.17
78_F 30_V 1.72 0.17
88_I 15_V 1.52 0.10
164_I 88_I 1.50 0.09
88_I 13_G 1.48 0.09
74_F 26_I 1.47 0.09
81_I 19_M 1.45 0.08
179_C 105_N 1.44 0.08
164_I 81_F 1.33 0.06
138_A 55_V 1.32 0.06
38_I 98_I 1.30 0.05
92_K 27_I 1.29 0.05
196_T 53_M 1.26 0.05
35_S 105_N 1.24 0.04
87_A 12_H 1.24 0.04
35_S 102_L 1.23 0.04
193_C 25_S 1.20 0.04
173_N 105_N 1.19 0.04
189_V 26_I 1.19 0.04
81_I 61_H 1.18 0.04
83_Y 80_A 1.13 0.03
196_T 46_I 1.12 0.03
182_L 20_T 1.11 0.03
35_S 94_G 1.10 0.03
104_L 50_I 1.09 0.03
193_C 98_I 1.09 0.03
108_F 19_M 1.09 0.03
99_I 58_V 1.08 0.03
192_I 25_S 1.07 0.02
35_S 90_I 1.07 0.02
91_Y 17_T 1.07 0.02
13_A 52_A 1.06 0.02
117_I 68_M 1.06 0.02
108_F 73_D 1.06 0.02
95_K 68_M 1.05 0.02
203_A 99_M 1.05 0.02
41_S 103_N 1.03 0.02
81_I 22_F 1.03 0.02
196_T 52_A 1.03 0.02
196_T 51_L 1.02 0.02
35_S 101_N 1.01 0.02
196_T 54_A 1.01 0.02
86_A 26_I 1.01 0.02
178_M 102_L 1.00 0.02
134_G 102_L 1.00 0.02
74_F 85_V 1.00 0.02
202_G 31_I 1.00 0.02
201_M 51_L 1.00 0.02
43_L 94_G 1.00 0.02
70_L 26_I 1.00 0.02
151_T 27_I 0.99 0.02
201_M 50_I 0.99 0.02
135_F 31_I 0.99 0.02
108_F 63_V 0.98 0.02
69_V 69_N 0.97 0.02
88_I 25_S 0.97 0.02
159_V 20_T 0.96 0.02
47_Y 74_E 0.96 0.02
163_Q 19_M 0.95 0.02
114_G 44_A 0.95 0.01
160_L 90_I 0.95 0.01
143_V 60_V 0.94 0.01
124_I 95_S 0.94 0.01
129_G 77_N 0.93 0.01
131_D 46_I 0.93 0.01
41_S 82_V 0.93 0.01
62_D 30_V 0.93 0.01
123_L 103_N 0.92 0.01
71_V 39_G 0.92 0.01
91_Y 13_G 0.92 0.01
107_L 27_I 0.92 0.01
43_L 90_I 0.91 0.01
26_I 51_L 0.91 0.01
100_S 52_A 0.91 0.01
85_M 26_I 0.91 0.01
104_L 53_M 0.90 0.01
126_N 10_A 0.90 0.01
49_V 95_S 0.90 0.01
117_I 27_I 0.89 0.01
171_S 70_T 0.89 0.01
64_F 62_L 0.89 0.01
43_L 76_W 0.89 0.01
65_E 40_A 0.88 0.01
158_A 42_S 0.88 0.01
145_T 105_N 0.88 0.01
74_F 30_V 0.87 0.01
181_S 107_M 0.86 0.01
196_T 24_L 0.86 0.01
95_K 20_T 0.86 0.01
56_G 62_L 0.86 0.01
62_D 22_F 0.86 0.01
202_G 32_P 0.86 0.01
138_A 7_H 0.86 0.01
37_C 61_H 0.86 0.01
34_M 84_T 0.85 0.01
54_T 91_L 0.85 0.01
62_D 44_A 0.85 0.01
197_V 98_I 0.84 0.01
94_N 96_I 0.84 0.01
70_L 88_I 0.84 0.01
27_F 108_M 0.84 0.01
176_R 97_W 0.83 0.01
161_M 55_V 0.83 0.01
17_G 71_K 0.83 0.01
148_L 68_M 0.83 0.01
70_L 30_V 0.83 0.01
145_T 99_M 0.82 0.01
104_L 4_S 0.82 0.01
106_W 77_N 0.82 0.01
50_L 81_F 0.82 0.01
132_R 61_H 0.82 0.01
53_G 52_A 0.82 0.01
137_S 59_L 0.82 0.01
180_L 66_L 0.82 0.01
114_G 64_C 0.81 0.01
160_L 99_M 0.81 0.01
174_R 63_V 0.81 0.01
113_I 10_A 0.81 0.01
23_G 64_C 0.81 0.01
132_R 80_A 0.80 0.01
202_G 102_L 0.80 0.01
35_S 103_N 0.80 0.01
93_N 25_S 0.80 0.01
154_L 91_L 0.80 0.01
31_I 100_W 0.80 0.01
175_T 83_F 0.80 0.01
92_K 22_F 0.79 0.01
53_G 31_I 0.79 0.01
196_T 48_G 0.79 0.01
70_L 37_M 0.79 0.01
176_R 32_P 0.79 0.01
181_S 12_H 0.79 0.01
190_V 87_I 0.78 0.01
77_L 65_F 0.78 0.01
77_L 57_Q 0.78 0.01
83_Y 36_V 0.78 0.01
32_Y 76_W 0.78 0.01
98_V 80_A 0.77 0.01
41_S 61_H 0.77 0.01
84_G 67_H 0.77 0.01
62_D 46_I 0.77 0.01
41_S 108_M 0.77 0.01
138_A 92_V 0.77 0.01
81_I 56_V 0.76 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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