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OPENSEQ.org

ATPD - ATPL
UniProt: P0ABA4 - P68699
Length: 256
Sequences: 943
Seq/Len: 3.73
I_Prob: 0.10

ATPD - ATP synthase subunit delta
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPD
ATPL - ATP synthase subunit c
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
145_K 47_P 1.15 0.10
153_I 71_G 1.07 0.08
167_R 62_A 1.02 0.07
69_L 26_I 1.01 0.06
6_T 58_G 0.97 0.06
50_G 18_G 0.96 0.06
164_V 26_I 0.95 0.05
16_F 65_M 0.95 0.05
7_V 68_V 0.91 0.05
158_M 64_P 0.90 0.04
42_E 15_V 0.90 0.04
105_A 14_A 0.89 0.04
159_V 50_R 0.89 0.04
93_L 50_R 0.89 0.04
83_N 31_L 0.88 0.04
154_R 75_M 0.88 0.04
140_N 33_G 0.88 0.04
118_S 7_D 0.86 0.04
134_S 44_D 0.85 0.04
12_A 40_A 0.85 0.04
163_S 66_I 0.85 0.04
31_M 61_D 0.84 0.04
86_L 36_L 0.81 0.03
85_R 50_R 0.81 0.03
143_I 20_A 0.80 0.03
92_V 31_L 0.80 0.03
38_V 22_I 0.79 0.03
167_R 17_M 0.79 0.03
148_M 55_I 0.79 0.03
28_W 61_D 0.78 0.03
2_S 55_I 0.78 0.03
10_P 61_D 0.77 0.03
125_I 55_I 0.77 0.03
53_A 68_V 0.77 0.03
19_A 73_Y 0.76 0.03
133_L 75_M 0.76 0.03
8_A 21_A 0.75 0.03
42_E 70_L 0.75 0.03
12_A 57_M 0.75 0.03
149_A 15_V 0.75 0.03
60_S 4_L 0.74 0.03
39_T 38_G 0.74 0.03
131_K 70_L 0.74 0.02
133_L 66_I 0.73 0.02
83_N 32_G 0.73 0.02
66_G 47_P 0.73 0.02
102_V 14_A 0.72 0.02
58_A 65_M 0.72 0.02
115_A 20_A 0.72 0.02
95_Q 45_L 0.71 0.02
56_T 73_Y 0.71 0.02
53_A 26_I 0.70 0.02
125_I 42_Q 0.70 0.02
125_I 74_V 0.69 0.02
46_E 34_K 0.69 0.02
123_A 49_L 0.69 0.02
35_A 70_L 0.69 0.02
171_L 37_E 0.69 0.02
81_A 31_L 0.69 0.02
147_V 63_I 0.69 0.02
8_A 50_R 0.69 0.02
63_A 19_L 0.69 0.02
116_A 20_A 0.69 0.02
166_G 39_A 0.69 0.02
125_I 37_E 0.69 0.02
75_N 49_L 0.69 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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