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ATPD - ATPG
UniProt: P0ABA4 - P0ABA6
Length: 464
Sequences: 1259
Seq/Len: 2.72
I_Prob: 0.02

ATPD - ATP synthase subunit delta
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPD
ATPG - ATP synthase gamma chain
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
101_A 19_K 1.09 0.02
80_M 277_L 1.09 0.02
135_R 208_Y 1.05 0.02
56_T 257_L 1.05 0.02
143_I 172_S 1.03 0.01
64_V 82_S 1.01 0.01
20_V 147_S 0.95 0.01
122_L 53_I 0.94 0.01
164_V 154_K 0.94 0.01
119_E 108_D 0.93 0.01
79_V 2_A 0.93 0.01
148_M 93_I 0.92 0.01
149_A 189_L 0.91 0.01
148_M 81_V 0.90 0.01
118_S 160_Y 0.89 0.01
86_L 242_A 0.89 0.01
143_I 8_R 0.89 0.01
165_R 53_I 0.88 0.01
73_G 79_L 0.88 0.01
96_F 162_E 0.87 0.01
121_Q 279_E 0.86 0.01
89_L 229_Y 0.85 0.01
46_E 185_I 0.84 0.01
10_P 91_L 0.84 0.01
85_R 244_M 0.84 0.01
94_E 64_K 0.84 0.01
167_R 115_L 0.83 0.01
32_L 84_D 0.83 0.01
69_L 28_A 0.82 0.01
57_L 277_L 0.82 0.01
24_S 79_L 0.82 0.01
10_P 128_S 0.82 0.01
87_N 72_D 0.82 0.01
23_Q 72_D 0.81 0.01
39_T 160_Y 0.81 0.01
10_P 31_K 0.81 0.01
42_E 73_V 0.81 0.01
39_T 8_R 0.80 0.01
147_V 105_T 0.80 0.01
102_V 79_L 0.80 0.01
109_V 85_R 0.80 0.01
159_V 223_Y 0.80 0.01
158_M 173_N 0.79 0.01
66_G 49_M 0.79 0.01
35_A 78_Y 0.79 0.01
9_R 160_Y 0.79 0.01
153_I 33_R 0.79 0.01
165_R 229_Y 0.78 0.01
35_A 6_E 0.78 0.01
154_R 99_L 0.78 0.01
77_I 115_L 0.78 0.01
106_T 168_L 0.78 0.01
155_A 138_T 0.77 0.01
110_D 211_D 0.77 0.01
167_R 262_Q 0.77 0.01
35_A 56_L 0.77 0.01
166_G 271_A 0.77 0.01
22_H 79_L 0.76 0.01
98_H 133_V 0.76 0.01
156_G 8_R 0.76 0.01
107_A 172_S 0.76 0.01
162_G 9_S 0.76 0.01
167_R 171_V 0.76 0.01
146_S 196_D 0.76 0.01
171_L 85_R 0.76 0.01
111_V 85_R 0.76 0.01
143_I 95_L 0.76 0.01
90_P 208_Y 0.75 0.01
105_A 48_T 0.75 0.01
154_R 215_L 0.75 0.01
119_E 95_L 0.75 0.01
147_V 33_R 0.75 0.01
4_F 129_V 0.74 0.01
90_P 104_K 0.74 0.01
46_E 251_T 0.74 0.01
137_V 22_K 0.74 0.01
23_Q 3_G 0.74 0.01
61_F 154_K 0.74 0.01
159_V 241_A 0.74 0.01
122_L 147_S 0.73 0.01
64_V 187_Q 0.73 0.01
116_A 58_H 0.73 0.01
6_T 177_N 0.73 0.01
120_Q 197_D 0.73 0.01
137_V 48_T 0.73 0.01
77_I 59_G 0.73 0.01
171_L 95_L 0.73 0.01
5_I 257_L 0.73 0.01
53_A 45_Y 0.73 0.01
45_A 88_C 0.73 0.01
170_R 173_N 0.73 0.01
67_E 212_P 0.72 0.01
38_V 214_A 0.72 0.01
72_N 124_S 0.72 0.01
118_S 208_Y 0.72 0.01
90_P 235_N 0.72 0.01
89_L 251_T 0.72 0.01
171_L 44_P 0.71 0.01
127_A 200_K 0.71 0.01
156_G 135_A 0.71 0.01
118_S 214_A 0.71 0.01
145_K 120_S 0.71 0.01
129_M 169_Y 0.71 0.01
94_E 124_S 0.71 0.01
100_R 5_K 0.71 0.01
80_M 96_F 0.71 0.01
102_V 172_S 0.71 0.01
104_E 7_I 0.71 0.01
147_V 1_M 0.70 0.01
39_T 91_L 0.70 0.01
10_P 32_M 0.70 0.01
84_G 7_I 0.70 0.01
123_A 182_V 0.70 0.01
174_V 198_D 0.70 0.01
8_A 177_N 0.70 0.01
152_I 85_R 0.70 0.01
84_G 134_V 0.69 0.01
109_V 35_S 0.69 0.01
21_E 78_Y 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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