| UniProt: | P0ABA6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10104 | ||
| Length: | 287 (287) | ||
| Sequences: | 1908 | ||
| Seq/Len: | 6.65 |
| ATPG
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 82_S | 122_G | 5.495 | 1.00 | |
| 211_D | 214_A | 3.857 | 1.00 | |
| 91_L | 235_N | 3.702 | 1.00 | |
| 239_E | 243_R | 3.659 | 1.00 | |
| 174_K | 184_T | 3.24 | 1.00 | |
| 28_A | 240_Q | 3.014 | 1.00 | |
| 248_K | 252_D | 2.937 | 1.00 | |
| 169_Y | 187_Q | 2.804 | 1.00 | |
| 75_R | 112_Q | 2.712 | 1.00 | |
| 77_G | 165_L | 2.545 | 1.00 | |
| 256_S | 260_E | 2.421 | 1.00 | |
| 18_Q | 255_G | 2.338 | 1.00 | |
| 79_L | 156_M | 2.308 | 1.00 | |
| 277_L | 281_V | 2.209 | 1.00 | |
| 177_N | 180_S | 2.167 | 1.00 | |
| 103_M | 115_L | 2.143 | 1.00 | |
| 167_K | 187_Q | 2.114 | 1.00 | |
| 176_I | 182_V | 2.11 | 1.00 | |
| 75_R | 114_D | 2.054 | 1.00 | |
| 78_Y | 102_E | 2.011 | 1.00 | |
| 91_L | 173_N | 2.006 | 1.00 | |
| 159_A | 164_R | 1.995 | 1.00 | |
| 82_S | 96_F | 1.971 | 1.00 | |
| 240_Q | 243_R | 1.914 | 1.00 | |
| 36_Q | 40_A | 1.914 | 1.00 | |
| 158_Q | 162_E | 1.801 | 1.00 | |
| 98_K | 101_A | 1.786 | 1.00 | |
| 149_L | 232_V | 1.753 | 1.00 | |
| 102_E | 105_T | 1.749 | 1.00 | |
| 100_L | 125_F | 1.727 | 1.00 | |
| 25_E | 248_K | 1.721 | 1.00 | |
| 15_Q | 262_Q | 1.712 | 1.00 | |
| 73_V | 166_D | 1.683 | 1.00 | |
| 71_R | 166_D | 1.653 | 1.00 | |
| 48_T | 51_K | 1.616 | 1.00 | |
| 154_K | 158_Q | 1.613 | 1.00 | |
| 170_I | 231_G | 1.612 | 1.00 | |
| 15_Q | 18_Q | 1.554 | 0.99 | |
| 117_M | 122_G | 1.552 | 0.99 | |
| 66_P | 69_E | 1.547 | 0.99 | |
| 36_Q | 175_F | 1.533 | 0.99 | |
| 171_V | 185_I | 1.524 | 0.99 | |
| 10_K | 267_K | 1.505 | 0.99 | |
| 117_M | 133_V | 1.503 | 0.99 | |
| 80_V | 99_L | 1.479 | 0.99 | |
| 174_K | 182_V | 1.462 | 0.99 | |
| 95_L | 171_V | 1.46 | 0.99 | |
| 173_N | 238_S | 1.423 | 0.99 | |
| 100_L | 126_F | 1.405 | 0.99 | |
| 123_V | 136_Q | 1.403 | 0.99 | |
| 155_V | 159_A | 1.403 | 0.99 | |
| 176_I | 180_S | 1.392 | 0.99 | |
| 114_D | 134_V | 1.391 | 0.99 | |
| 88_C | 92_N | 1.384 | 0.98 | |
| 18_Q | 25_E | 1.383 | 0.98 | |
| 99_L | 126_F | 1.374 | 0.98 | |
| 43_R | 234_E | 1.371 | 0.98 | |
| 88_C | 243_R | 1.36 | 0.98 | |
| 165_L | 168_L | 1.357 | 0.98 | |
| 101_A | 105_T | 1.347 | 0.98 | |
| 279_E | 282_S | 1.346 | 0.98 | |
| 275_Q | 279_E | 1.342 | 0.98 | |
| 264_V | 268_A | 1.342 | 0.98 | |
| 98_K | 102_E | 1.339 | 0.98 | |
| 77_G | 168_L | 1.336 | 0.98 | |
| 96_F | 125_F | 1.33 | 0.98 | |
| 117_M | 123_V | 1.327 | 0.98 | |
| 105_T | 109_K | 1.321 | 0.98 | |
| 268_A | 272_S | 1.289 | 0.97 | |
| 159_A | 165_L | 1.285 | 0.97 | |
| 7_I | 265_Y | 1.271 | 0.97 | |
| 102_E | 169_Y | 1.267 | 0.97 | |
| 27_V | 31_K | 1.263 | 0.97 | |
| 115_L | 131_G | 1.252 | 0.97 | |
| 26_M | 206_Y | 1.25 | 0.97 | |
| 135_A | 155_V | 1.247 | 0.96 | |
| 25_E | 244_M | 1.22 | 0.96 | |
| 98_K | 185_I | 1.218 | 0.96 | |
| 116_A | 156_M | 1.217 | 0.96 | |
| 114_D | 132_N | 1.208 | 0.96 | |
| 99_L | 103_M | 1.206 | 0.95 | |
| 7_I | 267_K | 1.203 | 0.95 | |
| 73_V | 167_K | 1.202 | 0.95 | |
| 29_A | 244_M | 1.174 | 0.95 | |
| 261_L | 264_V | 1.173 | 0.95 | |
| 275_Q | 278_T | 1.172 | 0.94 | |
| 99_L | 115_L | 1.171 | 0.94 | |
| 14_V | 17_T | 1.17 | 0.94 | |
| 99_L | 171_V | 1.149 | 0.94 | |
| 53_I | 216_L | 1.149 | 0.94 | |
| 123_V | 138_T | 1.121 | 0.93 | |
| 31_K | 240_Q | 1.117 | 0.92 | |
| 104_K | 108_D | 1.117 | 0.92 | |
| 281_V | 284_A | 1.116 | 0.92 | |
| 17_T | 20_I | 1.115 | 0.92 | |
| 83_T | 92_N | 1.111 | 0.92 | |
| 28_A | 121_K | 1.099 | 0.92 | |
| 17_T | 21_T | 1.085 | 0.91 | |
| 83_T | 173_N | 1.083 | 0.91 | |
| 17_T | 92_N | 1.081 | 0.91 | |
| 106_W | 111_V | 1.081 | 0.91 | |
| 102_E | 171_V | 1.081 | 0.91 | |
| 28_A | 40_A | 1.08 | 0.91 | |
| 84_D | 139_G | 1.08 | 0.91 | |
| 75_R | 164_R | 1.078 | 0.91 | |
| 104_K | 107_T | 1.073 | 0.90 | |
| 76_V | 169_Y | 1.073 | 0.90 | |
| 118_I | 152_P | 1.072 | 0.90 | |
| 215_L | 227_Q | 1.061 | 0.90 | |
| 96_F | 126_F | 1.061 | 0.90 | |
| 39_M | 237_A | 1.059 | 0.90 | |
| 78_Y | 113_C | 1.049 | 0.89 | |
| 11_I | 14_V | 1.048 | 0.89 | |
| 95_L | 99_L | 1.046 | 0.89 | |
| 156_M | 168_L | 1.04 | 0.88 | |
| 223_Y | 227_Q | 1.036 | 0.88 | |
| 25_E | 173_N | 1.03 | 0.88 | |
| 10_K | 221_R | 1.03 | 0.88 | |
| 32_M | 241_A | 1.03 | 0.88 | |
| 114_D | 165_L | 1.027 | 0.88 | |
| 183_P | 234_E | 1.023 | 0.87 | |
| 178_T | 241_A | 1.02 | 0.87 | |
| 192_P | 195_D | 1.015 | 0.87 | |
| 33_R | 37_D | 1.009 | 0.86 | |
| 153_V | 224_V | 1.009 | 0.86 | |
| 102_E | 106_W | 1.004 | 0.86 | |
| 19_K | 88_C | 1.001 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2qe7G | 1 | 0.993 | 100 | -0.02 | Contact Map | 0.547 |
| 3oaaG | 4 | 0.9965 | 100 | -0.014 | Contact Map | 0.762 |
| 2xokG | 1 | 0.9477 | 100 | 0.033 | Contact Map | 0.668 |
| 3ziaG | 2 | 0.9443 | 100 | 0.045 | Contact Map | 0.669 |
| 2ck3G | 1 | 0.9408 | 100 | 0.062 | Contact Map | 0.695 |
| 1fs0G | 1 | 0.8014 | 100 | 0.277 | Contact Map | 0.813 |
| 1qw2A | 1 | 0.338 | 8.8 | 0.969 | Contact Map | 0.029 |
| 1syqB | 1 | 0.0871 | 8.4 | 0.969 | Contact Map | 0.024 |
| 1t01B | 1 | 0.0836 | 7.3 | 0.97 | Contact Map | 0.017 |
| 2xusA | 2 | 0.1638 | 7 | 0.97 | Contact Map | 0.634 |
Sequence Conservation (Image Generated using WebLogo v3)