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OPENSEQ.org
ATPF - ATPL
UniProt: P0ABA0 - P68699
Length: 235
Sequences: 919
Seq/Len: 4.01
I_Prob: 0.08
ATPF - ATP synthase subunit b
Paralog alert: 0.13 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ATPF 		ATPL - ATP synthase subunit c
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_C 61_D 1.12 0.08
6_T 42_Q 1.10 0.08
80_N 60_V 1.02 0.06
114_K 22_I 0.99 0.05
135_I 32_G 0.97 0.05
111_A 11_M 0.96 0.05
26_W 62_A 0.95 0.05
6_T 54_F 0.94 0.05
29_L 17_M 0.89 0.04
100_K 49_L 0.88 0.04
17_F 71_G 0.87 0.04
22_M 65_M 0.87 0.04
139_S 44_D 0.86 0.04
9_G 65_M 0.85 0.04
38_K 18_G 0.84 0.03
19_L 58_G 0.84 0.03
25_V 61_D 0.82 0.03
114_K 38_G 0.82 0.03
83_R 20_A 0.81 0.03
89_E 38_G 0.80 0.03
135_I 26_I 0.80 0.03
90_A 36_L 0.80 0.03
128_A 44_D 0.79 0.03
2_N 42_Q 0.78 0.03
88_D 19_L 0.78 0.03
25_V 24_A 0.77 0.03
110_E 38_G 0.76 0.02
108_E 70_L 0.76 0.02
105_A 41_R 0.75 0.02
135_I 72_L 0.75 0.02
69_K 55_I 0.74 0.02
136_I 20_A 0.72 0.02
108_E 38_G 0.72 0.02
9_G 27_G 0.71 0.02
15_V 15_V 0.71 0.02
127_L 41_R 0.70 0.02
57_A 55_I 0.69 0.02
57_A 54_F 0.69 0.02
27_P 62_A 0.69 0.02
66_K 45_L 0.68 0.02
68_A 18_G 0.68 0.02
80_N 64_P 0.67 0.02
77_E 39_A 0.67 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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