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OPENSEQ.org

ATP6 - ATPG
UniProt: P0AB98 - P0ABA6
Length: 558
Sequences: 831
Seq/Len: 1.52
I_Prob: 0.03

ATP6 - ATP synthase subunit a
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATP6
ATPG - ATP synthase gamma chain
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
271_H 22_K 1.35 0.03
220_L 79_L 1.34 0.03
205_V 218_T 1.20 0.02
189_I 224_V 1.15 0.02
91_K 7_I 1.15 0.02
74_K 48_T 1.12 0.02
72_P 209_E 1.12 0.02
154_A 58_H 1.09 0.02
270_E 118_I 1.09 0.02
235_W 161_D 1.08 0.02
176_K 97_K 1.07 0.01
159_I 117_M 1.07 0.01
147_V 16_N 1.05 0.01
248_I 83_T 1.05 0.01
215_M 263_L 1.02 0.01
207_L 215_L 1.01 0.01
263_Y 271_A 0.99 0.01
9_Q 221_R 0.98 0.01
201_L 165_L 0.98 0.01
74_K 277_L 0.97 0.01
55_L 47_E 0.97 0.01
77_T 249_A 0.96 0.01
254_F 235_N 0.95 0.01
230_P 8_R 0.94 0.01
172_G 170_I 0.94 0.01
199_S 223_Y 0.94 0.01
264_L 260_E 0.93 0.01
66_K 160_Y 0.93 0.01
65_K 82_S 0.93 0.01
74_K 238_S 0.92 0.01
47_F 197_D 0.92 0.01
79_I 177_N 0.92 0.01
212_F 261_L 0.92 0.01
13_G 35_S 0.92 0.01
79_I 211_D 0.92 0.01
198_V 51_K 0.91 0.01
255_I 243_R 0.91 0.01
30_D 231_G 0.91 0.01
167_K 88_C 0.90 0.01
92_D 118_I 0.90 0.01
177_E 241_A 0.90 0.01
95_H 173_N 0.90 0.01
159_I 133_V 0.89 0.01
10_D 124_S 0.89 0.01
58_V 62_E 0.89 0.01
271_H 138_T 0.89 0.01
170_G 252_D 0.88 0.01
85_F 268_A 0.88 0.01
198_V 128_S 0.88 0.01
54_L 196_D 0.88 0.01
105_A 59_G 0.88 0.01
82_V 110_G 0.88 0.01
146_D 265_Y 0.88 0.01
74_K 42_S 0.87 0.01
135_G 165_L 0.87 0.01
152_S 231_G 0.87 0.01
205_V 138_T 0.86 0.01
213_G 241_A 0.86 0.01
157_V 85_R 0.86 0.01
255_I 197_D 0.85 0.01
45_S 67_Y 0.85 0.01
264_L 258_I 0.85 0.01
263_Y 253_N 0.85 0.01
73_G 175_F 0.84 0.01
198_V 238_S 0.84 0.01
194_I 105_T 0.84 0.01
152_S 212_P 0.84 0.01
161_I 259_K 0.84 0.01
13_G 221_R 0.84 0.01
85_F 275_Q 0.84 0.01
187_A 188_L 0.84 0.01
40_T 6_E 0.84 0.01
196_E 251_T 0.84 0.01
74_K 143_N 0.84 0.01
197_G 80_V 0.83 0.01
191_V 189_L 0.83 0.01
236_I 224_V 0.83 0.01
112_V 53_I 0.83 0.01
247_L 267_K 0.83 0.01
266_M 36_Q 0.83 0.01
155_L 161_D 0.83 0.01
68_T 160_Y 0.83 0.01
266_M 42_S 0.83 0.01
10_D 224_V 0.83 0.01
151_L 170_I 0.82 0.01
74_K 249_A 0.82 0.01
78_A 80_V 0.82 0.01
271_H 164_R 0.82 0.01
250_T 160_Y 0.82 0.01
190_P 233_V 0.81 0.01
114_L 127_N 0.81 0.01
163_F 220_L 0.81 0.01
2_A 221_R 0.81 0.01
224_L 222_R 0.81 0.01
179_T 255_G 0.81 0.01
154_A 101_A 0.81 0.01
201_L 170_I 0.81 0.01
86_V 83_T 0.81 0.01
267_A 46_A 0.81 0.01
147_V 115_L 0.81 0.01
214_N 14_V 0.80 0.01
152_S 68_L 0.80 0.01
138_A 99_L 0.80 0.01
82_V 134_V 0.80 0.01
6_M 221_R 0.80 0.01
207_L 71_R 0.80 0.01
202_S 152_P 0.80 0.01
154_A 106_W 0.80 0.01
74_K 10_K 0.80 0.01
231_W 46_A 0.80 0.01
46_M 277_L 0.80 0.01
240_P 260_E 0.80 0.01
225_I 177_N 0.80 0.01
67_A 176_I 0.80 0.01
230_P 231_G 0.79 0.01
248_I 226_S 0.79 0.01
90_V 81_V 0.79 0.01
248_I 181_Q 0.79 0.01
182_P 240_Q 0.79 0.01
233_S 160_Y 0.79 0.01
118_M 34_K 0.79 0.01
197_G 79_L 0.79 0.01
13_G 256_S 0.79 0.01
255_I 212_P 0.79 0.01
129_I 76_V 0.79 0.01
262_V 149_L 0.79 0.01
172_G 234_E 0.78 0.01
219_E 244_M 0.78 0.01
76_Q 223_Y 0.78 0.01
255_I 100_L 0.78 0.01
159_I 224_V 0.78 0.01
171_I 80_V 0.78 0.01
17_N 221_R 0.78 0.01
244_F 144_P 0.77 0.01
54_L 109_K 0.77 0.01
104_L 53_I 0.77 0.01
2_A 202_K 0.77 0.01
72_P 26_M 0.77 0.01
206_S 141_G 0.77 0.01
113_F 7_I 0.77 0.01
42_N 238_S 0.77 0.01
221_I 107_T 0.77 0.01
112_V 165_L 0.77 0.01
217_A 20_I 0.76 0.01
267_A 278_T 0.76 0.01
177_E 219_L 0.76 0.01
217_A 254_G 0.76 0.01
166_I 118_I 0.76 0.01
72_P 23_A 0.76 0.01
85_F 272_S 0.76 0.01
270_E 133_V 0.76 0.01
247_L 8_R 0.76 0.01
202_S 22_K 0.76 0.01
86_V 281_V 0.76 0.01
202_S 170_I 0.76 0.01
203_K 88_C 0.76 0.01
97_K 195_D 0.76 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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