May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FLIE - FLIN
UniProt: P0A8T5 - P15070
Length: 241
Sequences: 146
Seq/Len: 0.61
I_Prob: 0.04

FLIE - Flagellar hook-basal body complex protein FliE
Paralog alert: 0.12 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIE
FLIN - Flagellar motor switch protein FliN
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
79_S 126_I 1.77 0.04
45_I 101_I 1.40 0.01
78_A 34_A 1.39 0.01
45_I 122_I 1.38 0.01
76_Q 96_P 1.38 0.01
75_M 65_T 1.37 0.01
87_Q 117_K 1.35 0.01
78_A 10_D 1.32 0.01
8_E 54_I 1.27 0.01
84_M 122_I 1.24 0.01
84_M 101_I 1.22 0.01
100_M 100_L 1.20 0.01
52_A 54_I 1.20 0.01
100_M 60_I 1.19 0.01
79_S 58_M 1.18 0.01
71_V 78_L 1.18 0.01
91_K 60_I 1.15 0.01
98_E 87_V 1.15 0.01
87_Q 126_I 1.14 0.01
70_D 126_I 1.14 0.01
68_L 116_D 1.12 0.01
80_V 20_A 1.12 0.01
99_V 96_P 1.12 0.01
74_D 118_Y 1.12 0.01
49_Q 25_E 1.11 0.01
10_V 97_L 1.10 0.01
29_Q 23_L 1.10 0.01
98_E 100_L 1.10 0.01
45_I 21_E 1.09 0.01
79_S 134_R 1.09 0.01
85_G 101_I 1.08 0.01
76_Q 92_L 1.08 0.01
84_M 125_I 1.06 0.01
90_N 90_D 1.06 0.01
101_S 14_A 1.04 0.01
59_F 13_G 1.04 0.01
69_N 129_S 1.04 0.01
81_S 128_P 1.04 0.01
9_G 42_F 1.03 0.01
92_L 34_A 1.03 0.01
50_T 54_I 1.02 0.01
38_L 15_M 1.02 0.01
52_A 65_T 1.01 0.01
40_A 137_R 1.00 0.00
48_T 63_K 0.99 0.00
39_H 58_M 0.99 0.00
85_G 122_I 0.99 0.00
45_I 80_R 0.99 0.00
42_L 52_Q 0.99 0.00
102_M 113_V 0.99 0.00
93_V 116_D 0.99 0.00
97_Q 53_D 0.97 0.00
12_S 20_A 0.97 0.00
69_N 91_G 0.97 0.00
57_E 134_R 0.96 0.00
45_I 77_E 0.96 0.00
35_A 92_L 0.96 0.00
13_Q 74_T 0.96 0.00
81_S 54_I 0.96 0.00
83_Q 128_P 0.96 0.00
59_F 38_V 0.95 0.00
36_G 58_M 0.95 0.00
98_E 28_S 0.94 0.00
39_H 72_R 0.93 0.00
26_S 16_D 0.92 0.00
45_I 99_I 0.91 0.00
104_V 126_I 0.91 0.00
84_M 104_Y 0.91 0.00
93_V 132_M 0.91 0.00
41_A 136_S 0.91 0.00
45_I 91_G 0.90 0.00
29_Q 48_S 0.90 0.00
91_K 117_K 0.90 0.00
70_D 91_G 0.90 0.00
78_A 97_L 0.90 0.00
64_P 20_A 0.90 0.00
41_A 60_I 0.90 0.00
75_M 100_L 0.90 0.00
13_Q 76_K 0.89 0.00
23_A 58_M 0.89 0.00
84_M 108_Q 0.89 0.00
55_Q 101_I 0.88 0.00
68_L 93_A 0.88 0.00
33_S 28_S 0.88 0.00
56_A 20_A 0.88 0.00
49_Q 88_A 0.88 0.00
15_Q 60_I 0.87 0.00
75_M 129_S 0.87 0.00
43_D 10_D 0.87 0.00
3_A 88_A 0.87 0.00
71_V 29_T 0.87 0.00
65_G 92_L 0.87 0.00
97_Q 133_R 0.86 0.00
60_T 97_L 0.86 0.00
23_A 90_D 0.86 0.00
84_M 127_T 0.86 0.00
69_N 127_T 0.85 0.00
77_K 57_I 0.85 0.00
21_A 87_V 0.84 0.00
72_M 13_G 0.84 0.00
71_V 38_V 0.84 0.00
67_A 56_L 0.84 0.00
14_L 78_L 0.84 0.00
59_F 134_R 0.84 0.00
51_A 15_M 0.83 0.00
80_V 40_Q 0.83 0.00
16_A 35_A 0.83 0.00
87_Q 22_A 0.83 0.00
11_I 14_A 0.83 0.00
20_S 28_S 0.83 0.00
62_G 78_L 0.83 0.00
51_A 9_D 0.83 0.00
49_Q 80_R 0.83 0.00
70_D 39_F 0.83 0.00
69_N 116_D 0.82 0.00
15_Q 116_D 0.82 0.00
31_T 10_D 0.82 0.00
72_M 72_R 0.82 0.00
82_M 101_I 0.82 0.00
103_Q 29_T 0.82 0.00
93_V 117_K 0.82 0.00
101_S 34_A 0.81 0.00
16_A 72_R 0.81 0.00
75_M 133_R 0.81 0.00
83_Q 71_T 0.81 0.00
41_A 86_V 0.81 0.00
10_V 129_S 0.81 0.00
77_K 60_I 0.80 0.00
82_M 122_I 0.80 0.00
64_P 129_S 0.80 0.00
45_I 63_K 0.80 0.00
42_L 27_K 0.80 0.00
68_L 123_T 0.80 0.00
42_L 10_D 0.80 0.00
83_Q 39_F 0.80 0.00
91_K 124_D 0.80 0.00
75_M 127_T 0.80 0.00
82_M 73_M 0.79 0.00
50_T 26_Q 0.79 0.00
104_V 49_G 0.79 0.00
49_Q 86_V 0.79 0.00
61_L 9_D 0.79 0.00
103_Q 68_L 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0298 seconds.