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OPENSEQ.org

RUVX - YCEG
UniProt: P0A8I1 - P28306
Length: 478
Sequences: 445
Seq/Len: 0.95
I_Prob: 0.00

RUVX - Putative Holliday junction resolvase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVX
YCEG - UPF0755 protein YceG
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCEG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
121_V 98_M 1.36 0.00
99_S 160_W 1.16 0.00
80_A 86_T 1.12 0.00
99_S 184_K 1.11 0.00
15_I 319_N 1.07 0.00
104_R 84_A 1.06 0.00
20_G 264_D 1.05 0.00
107_L 69_F 1.02 0.00
89_V 58_Y 1.01 0.00
48_L 176_A 1.00 0.00
93_L 168_Y 0.98 0.00
75_R 288_G 0.98 0.00
116_L 282_G 0.95 0.00
71_P 295_A 0.94 0.00
127_V 83_K 0.93 0.00
24_T 160_W 0.92 0.00
121_V 323_H 0.92 0.00
6_L 288_G 0.90 0.00
71_P 226_D 0.90 0.00
57_I 133_I 0.90 0.00
109_E 315_T 0.90 0.00
100_T 145_V 0.89 0.00
107_L 323_H 0.89 0.00
77_R 44_L 0.89 0.00
68_T 216_E 0.87 0.00
17_V 302_P 0.87 0.00
57_I 77_P 0.87 0.00
49_L 53_L 0.87 0.00
112_G 165_T 0.86 0.00
91_V 296_A 0.86 0.00
84_H 300_K 0.86 0.00
72_L 301_T 0.86 0.00
10_F 42_F 0.85 0.00
125_S 157_I 0.85 0.00
48_L 104_S 0.85 0.00
116_L 165_T 0.85 0.00
90_E 281_P 0.85 0.00
83_I 260_L 0.85 0.00
107_L 204_D 0.85 0.00
90_E 316_F 0.85 0.00
18_A 216_E 0.84 0.00
109_E 229_A 0.84 0.00
20_G 126_Q 0.83 0.00
45_I 305_Y 0.82 0.00
78_K 317_N 0.82 0.00
128_I 181_A 0.81 0.00
82_R 223_S 0.81 0.00
30_L 210_T 0.81 0.00
7_A 184_K 0.81 0.00
12_T 79_L 0.81 0.00
25_G 164_D 0.80 0.00
43_N 44_L 0.80 0.00
61_L 248_V 0.80 0.00
8_F 84_A 0.80 0.00
90_E 122_D 0.80 0.00
47_R 177_L 0.79 0.00
58_I 184_K 0.79 0.00
77_R 248_V 0.78 0.00
23_I 269_T 0.77 0.00
79_F 283_A 0.76 0.00
45_I 108_A 0.76 0.00
107_L 54_G 0.76 0.00
104_R 160_W 0.76 0.00
8_F 328_Q 0.75 0.00
68_T 305_Y 0.75 0.00
8_F 124_L 0.74 0.00
20_G 240_M 0.74 0.00
107_L 319_N 0.74 0.00
99_S 262_R 0.74 0.00
74_A 230_S 0.74 0.00
13_K 42_F 0.74 0.00
48_L 162_W 0.73 0.00
94_H 286_T 0.73 0.00
99_S 223_S 0.73 0.00
86_R 54_G 0.73 0.00
89_V 237_R 0.73 0.00
17_V 40_T 0.73 0.00
114_R 215_I 0.72 0.00
66_D 165_T 0.72 0.00
123_S 314_H 0.72 0.00
76_A 170_A 0.72 0.00
65_M 120_L 0.72 0.00
55_D 181_A 0.72 0.00
42_W 129_E 0.72 0.00
33_I 62_I 0.72 0.00
104_R 206_N 0.72 0.00
29_P 155_E 0.72 0.00
6_L 91_P 0.72 0.00
120_K 69_F 0.71 0.00
132_S 288_G 0.71 0.00
24_T 282_G 0.71 0.00
7_A 182_H 0.71 0.00
133_Y 267_T 0.70 0.00
48_L 126_Q 0.70 0.00
101_V 176_A 0.70 0.00
10_F 48_T 0.70 0.00
10_F 224_E 0.70 0.00
50_K 226_D 0.70 0.00
102_E 219_T 0.70 0.00
86_R 332_K 0.70 0.00
53_Q 102_L 0.70 0.00
45_I 145_V 0.70 0.00
7_A 298_P 0.70 0.00
75_R 253_G 0.69 0.00
120_K 326_S 0.69 0.00
131_E 320_L 0.69 0.00
58_I 328_Q 0.69 0.00
20_G 209_V 0.69 0.00
87_F 241_R 0.69 0.00
57_I 41_I 0.69 0.00
35_A 287_P 0.69 0.00
117_N 160_W 0.69 0.00
92_K 214_I 0.69 0.00
83_I 46_P 0.69 0.00
107_L 294_A 0.69 0.00
89_V 317_N 0.69 0.00
70_Q 123_Y 0.69 0.00
67_G 161_F 0.68 0.00
78_K 60_D 0.68 0.00
125_S 282_G 0.68 0.00
15_I 273_T 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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