| UniProt: | P0A8I1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13290 | ||
| Length: | 138 (135) | ||
| Sequences: | 1682 | ||
| Seq/Len: | 12.46 |
| RUVX
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 80_A | 93_L | 3.615 | 1.00 | |
| 131_E | 135_E | 3.36 | 1.00 | |
| 69_E | 77_R | 3.306 | 1.00 | |
| 56_E | 92_K | 3.141 | 1.00 | |
| 31_P | 44_I | 3.081 | 1.00 | |
| 64_N | 68_T | 2.315 | 1.00 | |
| 70_Q | 73_T | 2.215 | 1.00 | |
| 5_L | 56_E | 2.146 | 1.00 | |
| 65_M | 98_L | 2.126 | 1.00 | |
| 49_L | 57_I | 1.983 | 1.00 | |
| 99_S | 128_I | 1.953 | 1.00 | |
| 35_A | 41_D | 1.95 | 1.00 | |
| 12_T | 75_R | 1.943 | 1.00 | |
| 32_A | 123_S | 1.848 | 1.00 | |
| 59_V | 80_A | 1.782 | 1.00 | |
| 94_H | 132_S | 1.717 | 1.00 | |
| 46_E | 87_F | 1.7 | 1.00 | |
| 44_I | 47_R | 1.691 | 1.00 | |
| 69_E | 73_T | 1.685 | 1.00 | |
| 19_V | 30_L | 1.672 | 1.00 | |
| 61_L | 77_R | 1.653 | 1.00 | |
| 46_E | 86_R | 1.651 | 1.00 | |
| 81_N | 84_H | 1.649 | 1.00 | |
| 3_G | 55_D | 1.618 | 1.00 | |
| 17_V | 48_L | 1.594 | 1.00 | |
| 10_F | 59_V | 1.565 | 1.00 | |
| 124_A | 127_V | 1.52 | 1.00 | |
| 104_R | 121_V | 1.518 | 1.00 | |
| 46_E | 50_K | 1.509 | 1.00 | |
| 56_E | 90_E | 1.496 | 1.00 | |
| 105_S | 109_E | 1.482 | 1.00 | |
| 6_L | 54_P | 1.474 | 1.00 | |
| 65_M | 97_R | 1.469 | 1.00 | |
| 8_F | 17_V | 1.466 | 1.00 | |
| 61_L | 93_L | 1.46 | 1.00 | |
| 47_R | 51_E | 1.438 | 1.00 | |
| 92_K | 133_Y | 1.419 | 1.00 | |
| 12_T | 72_L | 1.409 | 1.00 | |
| 15_I | 79_F | 1.372 | 0.99 | |
| 57_I | 89_V | 1.372 | 0.99 | |
| 72_L | 75_R | 1.361 | 0.99 | |
| 76_A | 80_A | 1.337 | 0.99 | |
| 23_I | 26_T | 1.329 | 0.99 | |
| 42_W | 82_R | 1.304 | 0.99 | |
| 30_L | 52_W | 1.268 | 0.99 | |
| 4_T | 52_W | 1.256 | 0.99 | |
| 29_P | 123_S | 1.238 | 0.98 | |
| 19_V | 54_P | 1.223 | 0.98 | |
| 10_F | 79_F | 1.215 | 0.98 | |
| 57_I | 87_F | 1.213 | 0.98 | |
| 77_R | 93_L | 1.201 | 0.98 | |
| 58_I | 92_K | 1.198 | 0.98 | |
| 112_G | 116_L | 1.137 | 0.97 | |
| 15_I | 41_D | 1.134 | 0.97 | |
| 6_L | 48_L | 1.097 | 0.96 | |
| 49_L | 87_F | 1.094 | 0.96 | |
| 20_G | 134_F | 1.091 | 0.96 | |
| 80_A | 84_H | 1.056 | 0.95 | |
| 72_L | 76_A | 1.047 | 0.94 | |
| 107_L | 120_K | 1.041 | 0.94 | |
| 64_N | 71_P | 1.036 | 0.94 | |
| 20_G | 24_T | 1.014 | 0.93 | |
| 106_G | 124_A | 1.008 | 0.93 | |
| 19_V | 52_W | 1.007 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1nu0A | 2 | 1 | 100 | 0.183 | Contact Map | 0.813 |
| 1vhxA | 2 | 1 | 100 | 0.198 | Contact Map | 0.732 |
| 1iv0A | 1 | 0.7101 | 99.9 | 0.443 | Contact Map | 0.412 |
| 4ep4A | 2 | 0.942 | 99.7 | 0.597 | Contact Map | 0.621 |
| 3bzcA | 1 | 0.942 | 98.6 | 0.76 | Contact Map | 0.512 |
| 1hjrA | 4 | 0.9493 | 97.8 | 0.809 | Contact Map | 0.685 |
| 3psiA | 1 | 0.8841 | 95.8 | 0.853 | Contact Map | 0.485 |
| 3psfA | 1 | 0.8841 | 95.6 | 0.855 | Contact Map | 0.504 |
| 3vovA | 4 | 0.9493 | 94 | 0.867 | Contact Map | 0.664 |
| 3epqA | 1 | 0.9638 | 93.9 | 0.868 | Contact Map | 0.647 |
Sequence Conservation (Image Generated using WebLogo v3)