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OPENSEQ.org

NRDR - RISB
UniProt: P0A8D0 - P61714
Length: 305
Sequences: 231
Seq/Len: 0.77
I_Prob: 0.04

NRDR - Transcriptional repressor NrdR
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NRDR
RISB - 6,7-dimethyl-8-ribityllumazine synthase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RISB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
125_I 119_T 1.68 0.04
103_V 153_A 1.63 0.04
118_K 91_E 1.33 0.02
46_L 145_L 1.32 0.02
74_L 78_A 1.28 0.01
5_F 106_Q 1.26 0.01
5_F 24_N 1.24 0.01
110_N 121_S 1.23 0.01
100_E 145_L 1.20 0.01
125_I 70_T 1.19 0.01
61_F 140_A 1.17 0.01
96_R 16_A 1.15 0.01
58_R 100_G 1.11 0.01
101_R 151_L 1.10 0.01
146_R 95_G 1.09 0.01
79_V 94_A 1.07 0.01
144_I 52_V 1.06 0.01
132_R 90_F 1.05 0.01
147_L 123_E 1.05 0.01
30_Q 114_F 1.04 0.01
21_E 76_V 1.04 0.01
144_I 18_T 1.03 0.01
132_R 17_I 1.02 0.01
125_I 27_N 1.02 0.01
7_F 152_K 1.01 0.01
119_L 93_V 1.00 0.01
16_S 91_E 1.00 0.01
88_I 74_D 1.00 0.01
125_I 88_A 1.00 0.01
119_L 37_A 1.00 0.01
132_R 122_I 0.99 0.01
39_T 124_Q 0.98 0.01
127_F 66_A 0.98 0.01
70_M 14_R 0.97 0.01
111_L 52_V 0.97 0.01
15_D 82_V 0.97 0.01
16_S 19_I 0.97 0.01
79_V 154_I 0.96 0.01
15_D 34_A 0.96 0.01
89_N 60_L 0.96 0.01
121_K 63_A 0.96 0.01
16_S 115_G 0.95 0.01
143_E 112_V 0.94 0.01
127_F 100_G 0.94 0.01
118_K 73_Y 0.94 0.01
72_R 102_A 0.94 0.01
68_S 106_Q 0.94 0.01
30_Q 76_V 0.93 0.01
86_M 77_I 0.93 0.01
12_K 19_I 0.93 0.01
103_V 14_R 0.93 0.01
83_D 101_L 0.93 0.01
54_S 129_A 0.93 0.01
66_L 145_L 0.93 0.01
75_E 114_F 0.93 0.01
105_S 76_V 0.92 0.01
103_V 105_A 0.91 0.01
66_L 78_A 0.91 0.00
45_E 23_N 0.91 0.00
15_D 66_A 0.91 0.00
79_V 90_F 0.91 0.00
96_R 67_L 0.90 0.00
103_V 35_I 0.90 0.00
55_N 94_A 0.90 0.00
144_I 121_S 0.90 0.00
69_G 114_F 0.90 0.00
41_F 101_L 0.89 0.00
95_L 46_D 0.89 0.00
102_E 90_F 0.88 0.00
92_K 101_L 0.88 0.00
62_N 39_K 0.88 0.00
104_P 71_G 0.88 0.00
62_N 110_I 0.87 0.00
102_E 30_L 0.87 0.00
122_V 101_L 0.87 0.00
94_Q 73_Y 0.87 0.00
92_K 50_T 0.87 0.00
117_K 52_V 0.86 0.00
106_K 60_L 0.86 0.00
25_V 8_V 0.86 0.00
86_M 14_R 0.86 0.00
10_D 107_D 0.85 0.00
10_D 151_L 0.85 0.00
84_V 30_L 0.85 0.00
100_E 42_G 0.85 0.00
59_E 72_K 0.85 0.00
2_H 67_L 0.84 0.00
54_S 32_E 0.83 0.00
84_V 106_Q 0.83 0.00
75_E 122_I 0.83 0.00
23_S 52_V 0.83 0.00
125_I 50_T 0.83 0.00
79_V 68_A 0.83 0.00
145_A 46_D 0.83 0.00
19_V 127_E 0.83 0.00
103_V 63_A 0.83 0.00
121_K 15_V 0.83 0.00
127_F 121_S 0.82 0.00
125_I 72_K 0.82 0.00
139_E 6_A 0.82 0.00
125_I 14_R 0.81 0.00
93_S 10_T 0.81 0.00
73_A 104_V 0.81 0.00
135_E 44_V 0.81 0.00
55_N 100_G 0.81 0.00
12_K 58_Y 0.81 0.00
112_V 41_I 0.80 0.00
143_E 76_V 0.80 0.00
84_V 17_I 0.80 0.00
115_Q 147_M 0.80 0.00
51_V 65_G 0.79 0.00
66_L 138_A 0.79 0.00
142_E 50_T 0.79 0.00
86_M 75_A 0.79 0.00
43_V 143_T 0.79 0.00
132_R 139_E 0.79 0.00
114_E 26_I 0.79 0.00
54_S 31_L 0.78 0.00
52_V 48_N 0.78 0.00
52_V 14_R 0.78 0.00
19_V 73_Y 0.78 0.00
47_V 16_A 0.78 0.00
93_S 51_V 0.78 0.00
127_F 36_D 0.78 0.00
124_Y 71_G 0.78 0.00
36_E 139_E 0.77 0.00
63_E 2_N 0.77 0.00
33_V 74_D 0.77 0.00
14_I 110_I 0.77 0.00
46_L 97_A 0.77 0.00
22_G 90_F 0.77 0.00
146_R 32_E 0.77 0.00
49_P 90_F 0.77 0.00
91_I 92_Y 0.76 0.00
146_R 58_Y 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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