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OPENSEQ.org

SURE - YGER
UniProt: P0A840 - Q46798
Length: 504
Sequences: 378
Seq/Len: 0.79
I_Prob: 0.00

SURE - 5'/3'-nucleotidase SurE
Paralog alert: 0.09 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SURE
YGER - Uncharacterized lipoprotein YgeR
Paralog alert: 0.43 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YGER
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
69_T 173_L 1.45 0.00
114_R 208_A 1.35 0.00
136_A 135_I 1.30 0.00
38_R 156_T 1.29 0.00
99_D 126_W 1.27 0.00
120_A 134_V 1.26 0.00
153_G 218_T 1.24 0.00
185_V 78_V 1.24 0.00
40_G 50_L 1.21 0.00
121_L 138_Y 1.21 0.00
86_I 221_A 1.20 0.00
61_I 60_S 1.17 0.00
73_Y 152_A 1.16 0.00
24_R 96_S 1.15 0.00
77_N 74_Y 1.15 0.00
166_D 158_I 1.15 0.00
199_I 154_R 1.14 0.00
48_E 182_I 1.14 0.00
233_A 235_A 1.14 0.00
109_A 73_P 1.13 0.00
101_V 219_D 1.12 0.00
115_H 219_D 1.11 0.00
125_L 167_V 1.11 0.00
217_V 98_A 1.11 0.00
89_S 27_S 1.10 0.00
72_V 50_L 1.09 0.00
86_I 218_T 1.08 0.00
172_R 229_I 1.07 0.00
113_G 42_Y 1.07 0.00
229_V 189_I 1.06 0.00
17_Q 193_A 1.06 0.00
222_V 188_Y 1.06 0.00
221_Y 220_A 1.04 0.00
36_R 176_Y 1.04 0.00
107_V 241_Y 1.04 0.00
13_A 212_I 1.04 0.00
160_V 187_D 1.02 0.00
75_G 149_D 1.02 0.00
164_P 189_I 1.02 0.00
208_A 229_I 1.02 0.00
46_T 42_Y 1.01 0.00
186_I 161_A 1.01 0.00
127_G 193_A 1.01 0.00
14_P 61_V 1.01 0.00
75_G 237_D 1.01 0.00
212_T 171_N 1.01 0.00
42_S 163_A 1.00 0.00
21_K 118_W 0.99 0.00
202_P 188_Y 0.99 0.00
154_R 203_G 0.99 0.00
152_T 135_I 0.98 0.00
75_G 70_I 0.98 0.00
194_N 145_N 0.97 0.00
181_P 75_T 0.96 0.00
133_T 139_S 0.96 0.00
214_F 126_W 0.96 0.00
154_R 235_A 0.96 0.00
60_D 217_S 0.95 0.00
145_L 165_K 0.95 0.00
40_G 52_R 0.95 0.00
156_L 172_Q 0.95 0.00
199_I 207_K 0.95 0.00
11_V 78_V 0.95 0.00
162_D 190_T 0.95 0.00
102_I 127_L 0.94 0.00
179_R 179_L 0.94 0.00
88_V 28_G 0.94 0.00
46_T 48_D 0.93 0.00
158_I 158_I 0.93 0.00
87_V 162_G 0.93 0.00
120_A 218_T 0.93 0.00
235_S 27_S 0.93 0.00
141_I 172_Q 0.92 0.00
71_C 64_L 0.92 0.00
214_F 233_A 0.92 0.00
164_P 62_K 0.92 0.00
209_G 229_I 0.92 0.00
80_M 212_I 0.92 0.00
174_T 50_L 0.91 0.00
175_R 183_K 0.91 0.00
29_V 180_I 0.91 0.00
125_L 194_H 0.91 0.00
172_R 92_I 0.91 0.00
199_I 178_N 0.91 0.00
200_G 191_A 0.91 0.00
167_Q 92_I 0.90 0.00
166_D 87_A 0.90 0.00
241_S 198_M 0.90 0.00
62_A 208_A 0.90 0.00
158_I 107_V 0.90 0.00
208_A 189_I 0.90 0.00
242_D 110_S 0.90 0.00
95_P 79_G 0.90 0.00
2_R 31_S 0.89 0.00
234_H 84_L 0.89 0.00
128_H 158_I 0.89 0.00
222_V 42_Y 0.89 0.00
171_I 119_P 0.88 0.00
168_I 22_L 0.88 0.00
130_H 189_I 0.88 0.00
138_T 180_I 0.88 0.00
91_I 105_A 0.88 0.00
40_G 80_Q 0.87 0.00
64_Q 234_T 0.87 0.00
73_Y 181_M 0.87 0.00
64_Q 57_T 0.87 0.00
201_P 70_I 0.87 0.00
77_N 195_N 0.87 0.00
115_H 167_V 0.86 0.00
99_D 172_Q 0.86 0.00
203_G 162_G 0.86 0.00
88_V 134_V 0.86 0.00
24_R 182_I 0.86 0.00
182_A 160_A 0.86 0.00
101_V 74_Y 0.86 0.00
44_S 162_G 0.86 0.00
48_E 130_T 0.85 0.00
74_L 206_V 0.85 0.00
134_A 176_Y 0.85 0.00
46_T 220_A 0.85 0.00
116_L 237_D 0.85 0.00
167_Q 102_T 0.85 0.00
114_R 126_W 0.85 0.00
1_M 237_D 0.85 0.00
85_D 150_I 0.85 0.00
37_N 193_A 0.85 0.00
57_E 159_Y 0.85 0.00
45_L 168_Y 0.85 0.00
218_D 64_L 0.85 0.00
101_V 174_R 0.85 0.00
95_P 220_A 0.85 0.00
233_A 133_K 0.85 0.00
95_P 237_D 0.85 0.00
228_H 234_T 0.84 0.00
1_M 158_I 0.84 0.00
138_T 232_R 0.84 0.00
87_V 116_S 0.84 0.00
197_Y 228_Q 0.84 0.00
189_Q 218_T 0.84 0.00
158_I 191_A 0.84 0.00
21_K 124_R 0.84 0.00
141_I 185_S 0.83 0.00
206_C 84_L 0.83 0.00
179_R 176_Y 0.83 0.00
182_A 218_T 0.83 0.00
146_C 160_A 0.83 0.00
45_L 179_L 0.83 0.00
201_P 36_T 0.83 0.00
176_C 181_M 0.83 0.00
222_V 217_S 0.83 0.00
69_T 193_A 0.83 0.00
108_A 171_N 0.82 0.00
11_V 237_D 0.82 0.00
94_G 174_R 0.82 0.00
61_I 156_T 0.82 0.00
113_G 128_W 0.82 0.00
119_P 65_A 0.82 0.00
158_I 237_D 0.82 0.00
49_S 57_T 0.82 0.00
76_V 70_I 0.82 0.00
132_D 97_T 0.82 0.00
86_I 239_L 0.81 0.00
162_D 42_Y 0.81 0.00
211_G 198_M 0.81 0.00
132_D 100_S 0.81 0.00
191_P 233_A 0.81 0.00
209_G 190_T 0.81 0.00
73_Y 233_A 0.81 0.00
240_V 158_I 0.81 0.00
132_D 92_I 0.81 0.00
69_T 236_I 0.81 0.00
131_Y 127_L 0.81 0.00
164_P 97_T 0.81 0.00
111_M 151_S 0.81 0.00
2_R 64_L 0.81 0.00
101_V 146_K 0.80 0.00
73_Y 202_N 0.80 0.00
36_R 181_M 0.80 0.00
95_P 158_I 0.80 0.00
156_L 128_W 0.80 0.00
16_I 234_T 0.80 0.00
244_L 130_T 0.80 0.00
83_R 77_E 0.80 0.00
210_P 102_T 0.80 0.00
127_G 137_P 0.80 0.00
69_T 67_L 0.80 0.00
69_T 167_V 0.80 0.00
207_D 202_N 0.80 0.00
75_G 225_L 0.80 0.00
115_H 75_T 0.80 0.00
114_R 74_Y 0.80 0.00
86_I 178_N 0.79 0.00
146_C 148_I 0.79 0.00
212_T 175_G 0.79 0.00
145_L 182_I 0.79 0.00
45_L 191_A 0.79 0.00
200_G 179_L 0.79 0.00
179_R 167_V 0.79 0.00
233_A 187_D 0.79 0.00
107_V 91_S 0.79 0.00
120_A 123_Q 0.79 0.00
120_A 55_R 0.79 0.00
203_G 202_N 0.79 0.00
210_P 240_R 0.79 0.00
219_E 207_K 0.79 0.00
101_V 56_T 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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