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OPENSEQ.org

RRF - RSEP
UniProt: P0A805 - P0AEH1
Length: 635
Sequences: 673
Seq/Len: 1.06
I_Prob: 0.02

RRF - Ribosome-recycling factor
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RRF
RSEP - Regulator of sigma E protease
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSEP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_I 342_V 1.47 0.02
128_V 114_F 1.42 0.02
184_Q 59_Y 1.41 0.01
182_L 257_W 1.38 0.01
57_V 436_V 1.28 0.01
83_M 27_F 1.27 0.01
12_R 31_R 1.27 0.01
168_I 215_I 1.25 0.01
69_V 428_Y 1.21 0.01
3_S 366_K 1.21 0.01
58_T 380_L 1.13 0.01
65_L 268_P 1.13 0.01
78_V 109_F 1.12 0.01
62_S 66_L 1.09 0.01
109_R 201_A 1.08 0.01
140_K 399_P 1.06 0.01
167_A 246_I 1.05 0.01
126_V 432_S 1.04 0.01
69_V 53_D 1.04 0.01
29_T 405_H 1.03 0.01
26_K 357_N 1.02 0.01
100_V 369_G 0.99 0.01
160_V 277_E 0.98 0.01
181_E 362_I 0.98 0.01
183_M 322_G 0.98 0.01
121_A 345_L 0.97 0.01
128_V 417_G 0.97 0.01
20_F 358_L 0.97 0.01
131_V 134_I 0.97 0.01
83_M 59_Y 0.97 0.01
100_V 321_Y 0.97 0.01
69_V 6_W 0.96 0.00
56_S 21_V 0.96 0.00
130_N 390_L 0.96 0.00
74_M 416_G 0.96 0.00
58_T 20_T 0.96 0.00
128_V 52_T 0.96 0.00
8_D 393_I 0.96 0.00
76_P 284_S 0.95 0.00
128_V 12_I 0.95 0.00
78_V 410_A 0.95 0.00
36_L 385_L 0.94 0.00
78_V 19_I 0.94 0.00
171_I 285_L 0.94 0.00
125_R 93_S 0.94 0.00
114_T 94_V 0.93 0.00
90_N 392_I 0.93 0.00
77_A 302_V 0.93 0.00
36_L 88_A 0.93 0.00
137_D 276_I 0.92 0.00
40_I 48_L 0.92 0.00
69_V 77_A 0.91 0.00
12_R 366_K 0.91 0.00
171_I 190_R 0.91 0.00
137_D 391_G 0.90 0.00
59_V 131_V 0.90 0.00
69_V 56_G 0.90 0.00
106_T 390_L 0.90 0.00
40_I 436_V 0.90 0.00
17_V 415_K 0.90 0.00
27_I 281_S 0.90 0.00
102_L 368_A 0.89 0.00
176_A 388_V 0.89 0.00
181_E 51_R 0.89 0.00
152_D 134_I 0.89 0.00
37_L 406_L 0.89 0.00
70_F 212_S 0.88 0.00
93_S 10_S 0.88 0.00
113_L 386_I 0.88 0.00
124_A 355_L 0.88 0.00
111_K 184_P 0.88 0.00
21_K 237_K 0.87 0.00
15_K 30_A 0.87 0.00
124_A 280_G 0.87 0.00
156_S 290_E 0.87 0.00
80_K 100_I 0.87 0.00
117_V 15_L 0.86 0.00
101_P 391_G 0.86 0.00
85_S 248_K 0.86 0.00
158_D 16_G 0.86 0.00
35_S 113_I 0.86 0.00
160_V 144_Q 0.86 0.00
185_F 50_R 0.86 0.00
145_D 153_A 0.86 0.00
22_T 342_V 0.86 0.00
34_P 388_V 0.85 0.00
109_R 386_I 0.85 0.00
58_T 110_I 0.85 0.00
37_L 445_N 0.84 0.00
183_M 33_C 0.84 0.00
25_S 266_D 0.84 0.00
14_D 246_I 0.84 0.00
140_K 439_M 0.83 0.00
19_A 265_R 0.83 0.00
102_L 73_L 0.83 0.00
59_V 386_I 0.83 0.00
163_L 245_R 0.83 0.00
146_K 449_R 0.83 0.00
173_A 251_G 0.83 0.00
106_T 18_L 0.83 0.00
6_R 42_I 0.83 0.00
185_F 106_V 0.83 0.00
169_K 389_N 0.82 0.00
78_V 48_L 0.82 0.00
136_N 100_I 0.82 0.00
116_I 416_G 0.82 0.00
114_T 106_V 0.82 0.00
23_Q 386_I 0.82 0.00
47_T 146_A 0.82 0.00
49_T 47_A 0.81 0.00
56_S 257_W 0.81 0.00
146_K 444_F 0.81 0.00
131_V 255_T 0.81 0.00
56_S 330_A 0.81 0.00
158_D 304_I 0.81 0.00
152_D 241_Q 0.81 0.00
135_A 39_R 0.81 0.00
105_L 345_L 0.80 0.00
27_I 258_V 0.80 0.00
128_V 94_V 0.80 0.00
152_D 259_T 0.80 0.00
181_E 134_I 0.79 0.00
71_D 161_D 0.79 0.00
90_N 239_G 0.79 0.00
29_T 82_P 0.79 0.00
44_Y 386_I 0.79 0.00
4_D 249_V 0.79 0.00
66_K 46_K 0.79 0.00
100_V 118_L 0.79 0.00
67_I 391_G 0.78 0.00
174_A 12_I 0.78 0.00
134_D 360_G 0.78 0.00
101_P 27_F 0.78 0.00
138_K 285_L 0.78 0.00
16_C 299_I 0.78 0.00
121_A 333_K 0.78 0.00
33_S 74_D 0.78 0.00
51_L 93_S 0.78 0.00
79_E 438_L 0.78 0.00
144_K 37_V 0.78 0.00
24_I 223_E 0.78 0.00
140_K 431_G 0.78 0.00
183_M 226_L 0.78 0.00
157_Q 19_I 0.77 0.00
171_I 273_A 0.77 0.00
85_S 8_L 0.77 0.00
152_D 168_Q 0.77 0.00
68_N 234_A 0.77 0.00
115_K 156_G 0.77 0.00
134_D 41_S 0.77 0.00
19_A 289_P 0.77 0.00
22_T 246_I 0.77 0.00
73_S 349_I 0.77 0.00
5_I 64_I 0.77 0.00
10_E 116_Y 0.76 0.00
50_P 303_G 0.76 0.00
181_E 207_E 0.76 0.00
96_S 109_F 0.76 0.00
2_I 20_T 0.76 0.00
159_D 377_V 0.76 0.00
100_V 315_Y 0.76 0.00
3_S 9_A 0.76 0.00
113_L 241_Q 0.76 0.00
182_L 80_V 0.75 0.00
159_D 248_K 0.75 0.00
147_E 48_L 0.75 0.00
19_A 16_G 0.75 0.00
43_E 396_F 0.75 0.00
18_E 292_K 0.75 0.00
125_R 200_W 0.75 0.00
112_D 231_P 0.75 0.00
135_A 392_I 0.75 0.00
112_D 51_R 0.75 0.00
41_V 83_E 0.75 0.00
126_V 102_A 0.75 0.00
40_I 268_P 0.75 0.00
16_C 19_I 0.75 0.00
168_I 93_S 0.74 0.00
33_S 392_I 0.74 0.00
29_T 62_A 0.74 0.00
152_D 238_A 0.74 0.00
41_V 270_K 0.74 0.00
59_V 245_R 0.74 0.00
112_D 149_T 0.74 0.00
54_L 15_L 0.74 0.00
41_V 17_V 0.74 0.00
11_V 279_Q 0.74 0.00
160_V 236_S 0.74 0.00
76_P 287_L 0.73 0.00
160_V 246_I 0.73 0.00
183_M 272_L 0.73 0.00
47_T 295_N 0.73 0.00
126_V 408_F 0.73 0.00
12_R 246_I 0.73 0.00
62_S 419_V 0.73 0.00
131_V 236_S 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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