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RPOA - RS11
UniProt: P0A7Z4 - P0A7R9
Length: 458
Sequences: 853
Seq/Len: 1.88
I_Prob: 0.17

RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
RS11 - 30S ribosomal protein S11
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS11
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
101_T 26_S 1.40 0.17
31_L 25_A 1.24 0.11
15_D 34_I 1.17 0.09
91_R 56_R 1.09 0.07
69_S 83_E 1.08 0.07
171_L 53_R 1.06 0.06
231_F 107_I 1.05 0.06
178_S 42_L 1.04 0.06
146_V 26_S 1.04 0.06
262_L 22_H 1.03 0.05
185_Y 11_R 1.03 0.05
96_D 32_V 1.00 0.05
248_E 107_I 0.98 0.05
188_E 11_R 0.97 0.04
175_A 111_T 0.96 0.04
217_I 49_G 0.96 0.04
25_K 10_K 0.95 0.04
231_F 55_S 0.95 0.04
235_R 26_S 0.93 0.04
185_Y 10_K 0.92 0.04
189_A 35_T 0.92 0.04
295_L 24_H 0.92 0.04
60_E 126_K 0.92 0.04
180_V 81_N 0.92 0.04
197_D 61_F 0.92 0.04
125_K 11_R 0.91 0.04
62_D 68_E 0.91 0.03
102_L 91_P 0.90 0.03
62_D 42_L 0.90 0.03
297_K 116_I 0.90 0.03
310_R 25_A 0.90 0.03
314_L 70_C 0.89 0.03
89_A 129_V 0.89 0.03
300_L 95_S 0.88 0.03
163_E 61_F 0.88 0.03
192_V 87_K 0.87 0.03
39_L 68_E 0.87 0.03
132_H 79_I 0.87 0.03
123_I 30_T 0.87 0.03
85_L 124_P 0.87 0.03
297_K 111_T 0.86 0.03
291_K 95_S 0.86 0.03
186_N 41_A 0.85 0.03
120_D 35_T 0.85 0.03
204_E 43_G 0.85 0.03
110_V 79_I 0.85 0.03
97_E 61_F 0.85 0.03
263_T 126_K 0.85 0.03
70_T 61_F 0.85 0.03
301_T 91_P 0.84 0.03
110_V 20_V 0.84 0.03
271_K 60_P 0.84 0.03
85_L 121_C 0.84 0.03
204_E 109_N 0.83 0.03
137_N 38_Q 0.83 0.03
164_D 126_K 0.83 0.03
51_M 22_H 0.83 0.03
70_T 23_I 0.83 0.03
217_I 24_H 0.82 0.03
226_E 23_I 0.82 0.03
212_D 99_A 0.82 0.03
213_P 85_M 0.82 0.03
33_R 36_D 0.82 0.02
133_L 23_I 0.81 0.02
75_Q 4_A 0.81 0.02
21_S 5_P 0.81 0.02
226_E 81_N 0.80 0.02
165_E 116_I 0.80 0.02
74_V 67_A 0.80 0.02
92_V 41_A 0.79 0.02
128_H 61_F 0.79 0.02
162_E 61_F 0.79 0.02
215_E 23_I 0.79 0.02
140_I 43_G 0.78 0.02
43_L 94_E 0.78 0.02
60_E 33_T 0.78 0.02
180_V 12_V 0.78 0.02
146_V 20_V 0.78 0.02
217_I 45_A 0.78 0.02
180_V 15_Q 0.78 0.02
311_G 104_G 0.78 0.02
267_A 61_F 0.78 0.02
269_C 22_H 0.78 0.02
259_D 18_D 0.77 0.02
302_E 110_I 0.77 0.02
210_T 60_P 0.77 0.02
318_L 22_H 0.77 0.02
205_M 37_R 0.77 0.02
75_Q 18_D 0.77 0.02
169_G 89_P 0.76 0.02
180_V 47_A 0.76 0.02
131_C 33_T 0.76 0.02
199_D 32_V 0.76 0.02
210_T 42_L 0.76 0.02
197_D 82_L 0.76 0.02
266_S 43_G 0.75 0.02
120_D 7_R 0.75 0.02
274_A 70_C 0.75 0.02
115_I 21_A 0.75 0.02
79_L 107_I 0.75 0.02
196_T 33_T 0.75 0.02
191_R 55_S 0.75 0.02
19_V 3_K 0.74 0.02
56_V 9_R 0.74 0.02
261_E 109_N 0.74 0.02
56_V 98_R 0.74 0.02
20_S 31_I 0.74 0.02
307_L 102_A 0.74 0.02
300_L 10_K 0.74 0.02
37_H 50_S 0.74 0.02
220_A 1_M 0.74 0.02
200_K 129_V 0.74 0.02
104_K 13_R 0.74 0.02
106_G 80_K 0.74 0.02
237_V 53_R 0.74 0.02
31_L 95_S 0.74 0.02
275_I 100_L 0.74 0.02
269_C 89_P 0.74 0.02
285_T 10_K 0.73 0.02
147_Q 83_E 0.73 0.02
290_L 89_P 0.73 0.02
17_E 61_F 0.73 0.02
274_A 116_I 0.73 0.02
153_V 17_S 0.73 0.02
283_Q 56_R 0.73 0.02
110_V 16_V 0.73 0.02
153_V 107_I 0.73 0.02
108_G 8_A 0.73 0.02
256_P 83_E 0.73 0.02
61_I 40_N 0.72 0.02
194_Q 35_T 0.72 0.02
187_V 84_V 0.72 0.02
116_T 117_P 0.72 0.02
189_A 102_A 0.72 0.02
64_V 68_E 0.71 0.02
48_L 87_K 0.71 0.02
304_K 30_T 0.71 0.02
70_T 100_L 0.71 0.02
205_M 9_R 0.71 0.02
169_G 52_F 0.71 0.02
123_I 5_P 0.71 0.02
184_A 116_I 0.71 0.02
316_M 95_S 0.71 0.01
123_I 18_D 0.71 0.01
283_Q 116_I 0.71 0.01
30_P 89_P 0.71 0.01
184_A 111_T 0.71 0.01
130_I 6_I 0.70 0.01
200_K 35_T 0.70 0.01
80_E 45_A 0.70 0.01
142_M 102_A 0.70 0.01
284_R 74_V 0.70 0.01
272_A 22_H 0.70 0.01
228_L 99_A 0.70 0.01
202_V 7_R 0.70 0.01
188_E 9_R 0.70 0.01
276_H 26_S 0.70 0.01
248_E 53_R 0.70 0.01
284_R 11_R 0.70 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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