| UniProt: | P0A7R9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10910 | ||
| Length: | 129 (129) | ||
| Sequences: | 1090 | ||
| Seq/Len: | 8.45 |
| RS11
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 20_V | 85_M | 2.886 | 1.00 | |
| 33_T | 41_A | 2.789 | 1.00 | |
| 82_L | 105_F | 2.603 | 1.00 | |
| 36_D | 40_N | 2.491 | 1.00 | |
| 45_A | 49_G | 2.384 | 1.00 | |
| 71_A | 103_A | 2.376 | 1.00 | |
| 83_E | 109_N | 2.175 | 1.00 | |
| 45_A | 69_R | 2.161 | 1.00 | |
| 84_V | 100_L | 2.016 | 1.00 | |
| 83_E | 108_T | 2.001 | 1.00 | |
| 100_L | 105_F | 1.991 | 1.00 | |
| 42_L | 79_I | 1.98 | 1.00 | |
| 72_D | 75_K | 1.897 | 1.00 | |
| 19_G | 79_I | 1.88 | 1.00 | |
| 34_I | 100_L | 1.843 | 1.00 | |
| 69_R | 73_A | 1.824 | 1.00 | |
| 14_K | 77_Y | 1.805 | 1.00 | |
| 21_A | 82_L | 1.779 | 1.00 | |
| 15_Q | 77_Y | 1.725 | 1.00 | |
| 27_F | 89_P | 1.721 | 1.00 | |
| 79_I | 105_F | 1.707 | 1.00 | |
| 70_C | 74_V | 1.68 | 1.00 | |
| 21_A | 34_I | 1.592 | 1.00 | |
| 4_A | 7_R | 1.477 | 1.00 | |
| 18_D | 81_N | 1.402 | 0.99 | |
| 42_L | 77_Y | 1.401 | 0.99 | |
| 21_A | 100_L | 1.37 | 0.99 | |
| 16_V | 77_Y | 1.369 | 0.99 | |
| 43_G | 70_C | 1.353 | 0.99 | |
| 16_V | 42_L | 1.315 | 0.99 | |
| 4_A | 8_A | 1.3 | 0.98 | |
| 85_M | 111_T | 1.292 | 0.98 | |
| 24_H | 31_I | 1.285 | 0.98 | |
| 81_N | 106_R | 1.269 | 0.98 | |
| 32_V | 70_C | 1.228 | 0.98 | |
| 50_S | 61_F | 1.217 | 0.97 | |
| 5_P | 13_R | 1.197 | 0.97 | |
| 86_V | 97_I | 1.189 | 0.97 | |
| 71_A | 82_L | 1.181 | 0.97 | |
| 17_S | 41_A | 1.16 | 0.96 | |
| 3_K | 7_R | 1.146 | 0.96 | |
| 85_M | 109_N | 1.132 | 0.96 | |
| 85_M | 113_V | 1.123 | 0.95 | |
| 7_R | 13_R | 1.122 | 0.95 | |
| 37_R | 41_A | 1.117 | 0.95 | |
| 54_G | 88_G | 1.109 | 0.95 | |
| 50_S | 69_R | 1.099 | 0.94 | |
| 5_P | 8_A | 1.098 | 0.94 | |
| 15_Q | 126_K | 1.095 | 0.94 | |
| 81_N | 108_T | 1.076 | 0.94 | |
| 55_S | 58_S | 1.076 | 0.94 | |
| 79_I | 82_L | 1.033 | 0.92 | |
| 45_A | 50_S | 1.031 | 0.92 | |
| 8_A | 23_I | 1.025 | 0.91 | |
| 82_L | 100_L | 1.023 | 0.91 | |
| 9_R | 12_V | 1.021 | 0.91 | |
| 50_S | 65_V | 1.016 | 0.91 | |
| 12_V | 116_I | 1.012 | 0.91 | |
| 46_T | 50_S | 1.01 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyK | 1 | 1 | 100 | 0.029 | Contact Map | 0.748 |
| 2vqeK | 1 | 0.9845 | 100 | 0.035 | Contact Map | 0.777 |
| 3bbnK | 1 | 1 | 100 | 0.048 | Contact Map | 0.666 |
| 3j20M | 1 | 0.969 | 100 | 0.105 | Contact Map | 0.643 |
| 4bpeK | 1 | 1 | 100 | 0.109 | Contact Map | 0.493 |
| 3u5cO | 1 | 0.969 | 100 | 0.116 | Contact Map | 0.318 |
| 4kixO | 1 | 0.8295 | 94.8 | 0.875 | Contact Map | 0.574 |
| 2zjrL | 1 | 0.7984 | 94.3 | 0.878 | Contact Map | 0.473 |
| 1ovyA | 1 | 0.8217 | 94.1 | 0.879 | Contact Map | 0.31 |
| 3v2dS | 1 | 0.8062 | 94 | 0.879 | Contact Map | 0.612 |
Sequence Conservation (Image Generated using WebLogo v3)