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OPENSEQ.org

RIMM - RS16
UniProt: P0A7X6 - P0A7T3
Length: 264
Sequences: 1117
Seq/Len: 4.45
I_Prob: 0.00

RIMM - Ribosome maturation factor RimM
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIMM
RS16 - 30S ribosomal protein S16
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS16
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
137_D 21_V 0.79 0.00
57_Q 46_K 0.79 0.00
92_V 50_T 0.76 0.00
126_K 46_K 0.75 0.00
127_V 56_R 0.74 0.00
158_F 56_R 0.74 0.00
156_V 59_H 0.73 0.00
134_G 14_R 0.70 0.00
150_G 36_V 0.70 0.00
101_L 3_T 0.69 0.00
134_G 69_D 0.64 0.00
167_V 52_L 0.64 0.00
35_T 69_D 0.64 0.00
108_W 76_K 0.64 0.00
110_D 20_V 0.63 0.00
108_W 27_A 0.63 0.00
140_V 74_L 0.63 0.00
85_L 55_D 0.63 0.00
107_Y 43_A 0.63 0.00
29_L 24_S 0.62 0.00
35_T 21_V 0.61 0.00
151_I 48_E 0.61 0.00
181_G 18_Q 0.61 0.00
77_V 4_I 0.61 0.00
105_D 71_V 0.60 0.00
132_E 21_V 0.59 0.00
44_Y 70_R 0.59 0.00
29_L 19_V 0.59 0.00
139_L 11_A 0.59 0.00
123_D 20_V 0.59 0.00
74_L 76_K 0.58 0.00
79_D 62_G 0.58 0.00
98_L 35_R 0.58 0.00
182_F 3_T 0.57 0.00
180_P 53_D 0.57 0.00
163_V 19_V 0.57 0.00
23_Y 67_I 0.57 0.00
99_P 46_K 0.56 0.00
49_I 70_R 0.56 0.00
53_G 57_I 0.56 0.00
42_F 54_L 0.55 0.00
30_R 40_N 0.55 0.00
178_W 1_M 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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