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OPENSEQ.org

RIBA - RISB
UniProt: P0A7I7 - P61714
Length: 352
Sequences: 737
Seq/Len: 2.12
I_Prob: 0.00

RIBA - GTP cyclohydrolase-2
Paralog alert: 0.21 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: RIBA
RISB - 6,7-dimethyl-8-ribityllumazine synthase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RISB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
6_V 145_L 1.01 0.00
165_I 7_N 0.91 0.00
179_N 140_A 0.90 0.00
6_V 44_V 0.85 0.00
15_W 121_S 0.85 0.00
71_L 22_F 0.81 0.00
179_N 90_F 0.79 0.00
165_I 2_N 0.79 0.00
23_F 75_A 0.79 0.00
11_L 19_I 0.78 0.00
157_I 91_E 0.77 0.00
129_D 148_I 0.76 0.00
29_G 46_D 0.76 0.00
78_I 22_F 0.75 0.00
60_L 75_A 0.75 0.00
48_A 13_A 0.74 0.00
14_P 78_A 0.72 0.00
29_G 75_A 0.71 0.00
61_F 48_N 0.71 0.00
129_D 91_E 0.70 0.00
165_I 32_E 0.69 0.00
89_H 1_M 0.69 0.00
64_R 125_A 0.69 0.00
145_V 96_G 0.68 0.00
89_H 8_V 0.67 0.00
78_I 50_T 0.66 0.00
75_L 101_L 0.66 0.00
13_T 44_V 0.65 0.00
89_H 95_G 0.65 0.00
146_R 81_T 0.65 0.00
165_I 116_V 0.65 0.00
124_A 154_I 0.64 0.00
99_L 44_V 0.63 0.00
37_Y 22_F 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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