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OPENSEQ.org

RBFA - RS15
UniProt: P0A7G2 - P0ADZ4
Length: 222
Sequences: 582
Seq/Len: 2.75
I_Prob: 0.67

RBFA - Ribosome-binding factor A
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RBFA
RS15 - 30S ribosomal protein S15
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS15
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_S 2_S 1.50 0.67
55_T 89_R 1.28 0.48
101_N 13_S 1.09 0.30
20_A 84_R 1.09 0.30
77_G 50_H 1.03 0.26
85_K 80_Q 1.02 0.24
73_Q 58_R 1.00 0.23
55_T 48_K 0.99 0.22
10_R 2_S 0.99 0.22
11_V 43_F 0.98 0.21
13_Q 27_V 0.97 0.20
32_L 6_E 0.95 0.19
80_R 60_V 0.94 0.19
19_I 87_L 0.93 0.18
104_V 11_I 0.90 0.16
113_V 40_Q 0.90 0.16
40_G 14_E 0.89 0.15
13_Q 57_L 0.87 0.14
48_A 17_R 0.85 0.13
36_T 71_K 0.84 0.13
43_M 33_T 0.83 0.12
17_K 3_L 0.83 0.12
16_Q 12_V 0.82 0.12
23_L 87_L 0.82 0.11
11_V 6_E 0.81 0.11
10_R 53_R 0.81 0.11
104_V 40_Q 0.80 0.11
15_M 48_K 0.80 0.10
70_K 43_F 0.79 0.10
67_A 83_E 0.79 0.10
15_M 71_K 0.79 0.10
103_L 2_S 0.78 0.10
49_Y 87_L 0.78 0.10
58_N 8_T 0.78 0.10
74_E 4_S 0.78 0.10
7_R 47_K 0.78 0.10
80_R 51_H 0.77 0.09
17_K 59_M 0.76 0.09
55_T 47_K 0.76 0.09
11_V 46_H 0.75 0.09
85_K 62_Q 0.75 0.08
88_R 44_A 0.75 0.08
73_Q 89_R 0.74 0.08
16_Q 27_V 0.74 0.08
119_H 80_Q 0.73 0.08
43_M 72_R 0.73 0.08
96_T 20_N 0.73 0.08
48_A 35_Q 0.73 0.08
104_V 57_L 0.72 0.07
92_V 48_K 0.72 0.07
85_K 27_V 0.72 0.07
117_V 41_G 0.72 0.07
89_L 43_F 0.72 0.07
65_V 15_F 0.72 0.07
118_K 15_F 0.72 0.07
15_M 37_N 0.72 0.07
32_L 74_D 0.71 0.07
22_I 62_Q 0.71 0.07
71_A 57_L 0.71 0.07
106_G 71_K 0.70 0.07
102_S 14_E 0.70 0.07
119_H 6_E 0.70 0.07
26_E 62_Q 0.70 0.07
80_R 87_L 0.69 0.06
36_T 20_N 0.69 0.06
31_R 50_H 0.68 0.06
26_E 6_E 0.68 0.06
89_L 62_Q 0.68 0.06
14_E 84_R 0.68 0.06
44_S 3_L 0.68 0.06
108_R 20_N 0.67 0.06
27_I 70_L 0.67 0.06
11_V 33_T 0.67 0.06
60_K 13_S 0.67 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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