| UniProt: | P0A7G2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11178 | ||
| Length: | 133 (123) | ||
| Sequences: | 1402 | ||
| Seq/Len: | 11.40 |
| RBFA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 73_Q | 76_S | 2.866 | 1.00 | |
| 54_V | 69_I | 2.766 | 1.00 | |
| 51_K | 98_F | 2.625 | 1.00 | |
| 111_N | 115_S | 2.504 | 1.00 | |
| 48_A | 91_I | 2.488 | 1.00 | |
| 44_S | 49_Y | 2.264 | 1.00 | |
| 19_I | 52_V | 2.172 | 1.00 | |
| 18_E | 86_A | 2.119 | 1.00 | |
| 79_I | 95_L | 2.065 | 1.00 | |
| 13_Q | 16_Q | 2.011 | 1.00 | |
| 80_R | 94_E | 1.957 | 1.00 | |
| 109_M | 113_V | 1.892 | 1.00 | |
| 22_I | 79_I | 1.832 | 1.00 | |
| 49_Y | 96_T | 1.829 | 1.00 | |
| 61_D | 64_A | 1.75 | 1.00 | |
| 84_G | 92_V | 1.741 | 1.00 | |
| 102_S | 106_G | 1.695 | 1.00 | |
| 81_S | 85_K | 1.671 | 1.00 | |
| 110_S | 114_T | 1.666 | 1.00 | |
| 69_I | 73_Q | 1.616 | 1.00 | |
| 78_F | 82_L | 1.577 | 1.00 | |
| 11_V | 89_L | 1.523 | 1.00 | |
| 38_V | 54_V | 1.492 | 1.00 | |
| 51_K | 96_T | 1.488 | 1.00 | |
| 54_V | 72_L | 1.462 | 1.00 | |
| 82_L | 86_A | 1.461 | 1.00 | |
| 45_R | 48_A | 1.458 | 1.00 | |
| 83_L | 92_V | 1.454 | 1.00 | |
| 31_R | 75_A | 1.448 | 1.00 | |
| 66_K | 70_K | 1.427 | 1.00 | |
| 32_L | 71_A | 1.421 | 1.00 | |
| 21_L | 86_A | 1.416 | 1.00 | |
| 41_V | 50_A | 1.416 | 1.00 | |
| 71_A | 74_E | 1.358 | 0.99 | |
| 107_M | 111_N | 1.343 | 0.99 | |
| 19_I | 79_I | 1.334 | 0.99 | |
| 22_I | 83_L | 1.325 | 0.99 | |
| 8_P | 12_A | 1.322 | 0.99 | |
| 105_E | 108_R | 1.307 | 0.99 | |
| 64_A | 67_A | 1.304 | 0.99 | |
| 82_L | 85_K | 1.296 | 0.99 | |
| 12_A | 43_M | 1.273 | 0.99 | |
| 115_S | 119_H | 1.271 | 0.99 | |
| 29_D | 71_A | 1.242 | 0.98 | |
| 71_A | 75_A | 1.238 | 0.98 | |
| 29_D | 32_L | 1.232 | 0.98 | |
| 26_E | 82_L | 1.216 | 0.98 | |
| 14_E | 17_K | 1.21 | 0.98 | |
| 37_T | 55_T | 1.182 | 0.98 | |
| 63_D | 67_A | 1.15 | 0.97 | |
| 15_M | 83_L | 1.146 | 0.97 | |
| 112_L | 116_V | 1.129 | 0.97 | |
| 14_E | 18_E | 1.116 | 0.96 | |
| 108_R | 111_N | 1.097 | 0.96 | |
| 113_V | 117_V | 1.097 | 0.96 | |
| 102_S | 105_E | 1.088 | 0.96 | |
| 65_V | 101_N | 1.061 | 0.95 | |
| 105_E | 109_M | 1.048 | 0.94 | |
| 18_E | 22_I | 1.035 | 0.94 | |
| 55_T | 99_Y | 1.031 | 0.94 | |
| 80_R | 92_V | 1.03 | 0.94 | |
| 30_P | 75_A | 1.018 | 0.93 | |
| 115_S | 118_K | 1.009 | 0.93 | |
| 67_A | 70_K | 1.008 | 0.93 | |
| 44_S | 96_T | 1.003 | 0.93 | |
| 120_D | 123_R | 1.003 | 0.93 | |
| 101_N | 105_E | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1josA | 1 | 0.9624 | 100 | 0.109 | Contact Map | 0.653 |
| 1pa4A | 1 | 0.8722 | 100 | 0.149 | Contact Map | 0.525 |
| 2e7gA | 1 | 0.8647 | 100 | 0.204 | Contact Map | 0.487 |
| 2kzfA | 1 | 0.782 | 100 | 0.217 | Contact Map | 0.555 |
| 2dyjA | 2 | 0.7143 | 100 | 0.28 | Contact Map | 0.781 |
| 1ybxA | 2 | 0.6391 | 11.8 | 0.929 | Contact Map | 0.509 |
| 1vpuA | 1 | 0.203 | 8.7 | 0.933 | Contact Map | 0.582 |
| 3odmA | 8 | 0.594 | 7 | 0.936 | Contact Map | 0.188 |
| 3dbiA | 3 | 0.7519 | 6.6 | 0.937 | Contact Map | 0.44 |
| 1qpzA | 1 | 0.7143 | 4.9 | 0.941 | Contact Map | 0.183 |
Sequence Conservation (Image Generated using WebLogo v3)