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OPENSEQ.org

QUEA - TGT
UniProt: P0A7F9 - P0A847
Length: 731
Sequences: 522
Seq/Len: 0.73
I_Prob: 0.00

QUEA - S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Paralog alert: 0.08 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: QUEA
TGT - Queuine tRNA-ribosyltransferase
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TGT
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_S 70_M 1.35 0.00
175_A 342_M 1.13 0.00
243_A 105_T 1.06 0.00
257_S 224_M 1.04 0.00
8_F 116_N 1.02 0.00
38_L 68_E 1.01 0.00
282_I 239_K 0.99 0.00
314_F 152_W 0.98 0.00
272_L 153_D 0.98 0.00
24_S 69_I 0.98 0.00
209_A 162_S 0.97 0.00
271_D 186_I 0.97 0.00
261_L 312_R 0.97 0.00
118_T 123_D 0.96 0.00
77_K 331_T 0.95 0.00
164_L 147_P 0.94 0.00
316_G 50_G 0.93 0.00
318_Q 260_I 0.93 0.00
147_M 21_R 0.93 0.00
244_K 16_R 0.93 0.00
65_P 19_F 0.93 0.00
233_P 360_D 0.92 0.00
65_P 135_G 0.92 0.00
9_E 284_V 0.92 0.00
115_I 331_T 0.91 0.00
83_E 59_F 0.90 0.00
51_N 363_Q 0.88 0.00
35_T 311_S 0.88 0.00
234_Q 83_K 0.88 0.00
193_L 49_T 0.88 0.00
282_I 224_M 0.88 0.00
265_A 101_I 0.87 0.00
141_L 141_I 0.87 0.00
319_H 290_K 0.86 0.00
250_V 331_T 0.85 0.00
251_I 345_L 0.84 0.00
142_N 142_F 0.83 0.00
240_V 176_L 0.83 0.00
263_S 112_R 0.83 0.00
193_L 123_D 0.82 0.00
186_D 59_F 0.82 0.00
103_P 123_D 0.82 0.00
304_E 54_I 0.82 0.00
315_A 149_P 0.82 0.00
222_D 200_K 0.82 0.00
85_M 59_F 0.81 0.00
337_Y 267_M 0.81 0.00
293_V 119_P 0.81 0.00
337_Y 338_Y 0.81 0.00
296_L 151_D 0.81 0.00
91_I 59_F 0.81 0.00
120_T 47_E 0.81 0.00
319_H 71_K 0.80 0.00
202_F 136_S 0.80 0.00
342_F 237_A 0.80 0.00
100_A 181_A 0.80 0.00
64_I 287_R 0.80 0.00
296_L 322_N 0.79 0.00
102_K 351_E 0.79 0.00
51_N 300_P 0.79 0.00
162_R 68_E 0.79 0.00
129_V 8_T 0.79 0.00
52_P 196_D 0.79 0.00
45_D 3_F 0.78 0.00
190_L 77_H 0.78 0.00
233_P 238_D 0.78 0.00
12_E 354_L 0.78 0.00
316_G 340_R 0.78 0.00
251_I 167_K 0.78 0.00
1_M 357_F 0.78 0.00
124_G 313_A 0.77 0.00
304_E 40_G 0.77 0.00
107_L 24_V 0.77 0.00
72_K 255_G 0.77 0.00
218_D 151_D 0.77 0.00
45_D 300_P 0.77 0.00
314_F 70_M 0.77 0.00
244_K 127_S 0.77 0.00
77_K 287_R 0.77 0.00
280_T 243_L 0.76 0.00
94_H 19_F 0.76 0.00
315_A 255_G 0.76 0.00
182_G 232_C 0.76 0.00
133_D 154_Y 0.76 0.00
58_F 146_T 0.76 0.00
40_H 1_M 0.76 0.00
171_E 153_D 0.75 0.00
203_V 230_H 0.75 0.00
80_V 206_G 0.75 0.00
65_P 21_R 0.75 0.00
25_S 11_R 0.75 0.00
293_V 186_I 0.75 0.00
265_A 186_I 0.75 0.00
291_K 7_T 0.75 0.00
281_Q 222_A 0.75 0.00
157_D 75_D 0.75 0.00
290_Y 101_I 0.74 0.00
58_F 159_M 0.74 0.00
82_V 59_F 0.74 0.00
239_A 161_M 0.74 0.00
86_L 71_K 0.74 0.00
200_M 260_I 0.74 0.00
213_Q 180_N 0.74 0.00
13_S 151_D 0.74 0.00
191_E 70_M 0.73 0.00
186_D 285_K 0.73 0.00
67_R 43_P 0.73 0.00
273_I 16_R 0.73 0.00
77_K 141_I 0.73 0.00
65_P 258_R 0.73 0.00
125_A 40_G 0.73 0.00
322_N 260_I 0.73 0.00
248_N 235_I 0.73 0.00
169_Y 161_M 0.72 0.00
26_C 139_V 0.72 0.00
321_M 40_G 0.72 0.00
176_V 36_G 0.72 0.00
175_A 179_K 0.72 0.00
17_H 302_C 0.72 0.00
330_E 345_L 0.72 0.00
251_I 151_D 0.72 0.00
147_M 258_R 0.72 0.00
76_G 263_F 0.72 0.00
302_L 164_R 0.71 0.00
186_D 114_P 0.71 0.00
24_S 300_P 0.71 0.00
53_G 294_D 0.70 0.00
249_R 179_K 0.70 0.00
329_E 167_K 0.70 0.00
88_D 68_E 0.70 0.00
2_R 119_P 0.70 0.00
296_L 133_D 0.70 0.00
230_A 21_R 0.70 0.00
9_E 156_K 0.70 0.00
193_L 25_E 0.70 0.00
75_G 263_F 0.70 0.00
245_A 105_T 0.70 0.00
227_S 129_E 0.70 0.00
347_P 154_Y 0.70 0.00
171_E 100_D 0.70 0.00
8_F 291_Y 0.70 0.00
202_F 260_I 0.70 0.00
227_S 118_D 0.69 0.00
253_V 220_P 0.69 0.00
325_K 305_Y 0.69 0.00
41_G 169_S 0.69 0.00
238_D 103_K 0.69 0.00
98_S 62_W 0.69 0.00
53_G 106_E 0.69 0.00
62_R 182_L 0.69 0.00
240_V 190_V 0.69 0.00
192_K 253_V 0.69 0.00
218_D 171_E 0.69 0.00
117_A 216_A 0.69 0.00
141_L 142_F 0.69 0.00
188_P 344_G 0.69 0.00
112_D 292_K 0.69 0.00
273_I 174_D 0.69 0.00
131_F 298_L 0.69 0.00
291_K 78_D 0.69 0.00
202_F 23_V 0.69 0.00
26_C 305_Y 0.69 0.00
258_V 253_V 0.69 0.00
98_S 169_S 0.68 0.00
64_I 277_L 0.68 0.00
198_V 358_V 0.68 0.00
43_F 332_I 0.68 0.00
172_K 298_L 0.68 0.00
14_L 307_C 0.68 0.00
14_L 302_C 0.68 0.00
105_A 151_D 0.68 0.00
8_F 99_G 0.68 0.00
198_V 151_D 0.68 0.00
164_L 272_A 0.68 0.00
120_T 113_N 0.68 0.00
13_S 70_M 0.68 0.00
258_V 287_R 0.68 0.00
141_L 294_D 0.68 0.00
111_D 212_V 0.67 0.00
94_H 59_F 0.67 0.00
218_D 306_T 0.67 0.00
138_L 277_L 0.67 0.00
100_A 292_K 0.67 0.00
204_T 251_D 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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