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OPENSEQ.org

PYRH - RNH2
UniProt: P0A7E9 - P10442
Length: 439
Sequences: 383
Seq/Len: 0.91
I_Prob: 0.00

PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
RNH2 - Ribonuclease HII
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNH2
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
30_D 141_V 1.25 0.00
159_D 80_E 1.24 0.00
203_A 154_F 1.11 0.00
88_G 71_G 1.10 0.00
53_V 35_D 1.07 0.00
192_V 89_L 1.07 0.00
157_E 18_V 1.06 0.00
10_K 179_A 1.03 0.00
191_E 95_V 0.98 0.00
180_T 70_L 0.96 0.00
37_M 124_K 0.96 0.00
50_Q 160_A 0.95 0.00
183_M 168_A 0.95 0.00
158_A 137_I 0.93 0.00
159_D 171_L 0.92 0.00
13_L 27_V 0.91 0.00
239_I 180_T 0.90 0.00
107_A 109_G 0.88 0.00
100_V 18_V 0.87 0.00
172_T 71_G 0.86 0.00
213_L 18_V 0.86 0.00
215_I 123_V 0.86 0.00
36_R 15_V 0.86 0.00
239_I 37_A 0.86 0.00
10_K 71_G 0.85 0.00
98_A 186_S 0.84 0.00
195_K 179_A 0.84 0.00
165_T 107_I 0.84 0.00
196_E 168_A 0.84 0.00
198_K 60_E 0.82 0.00
40_E 35_D 0.82 0.00
205_F 133_S 0.82 0.00
156_I 89_L 0.82 0.00
52_G 48_K 0.82 0.00
158_A 31_A 0.81 0.00
110_L 188_G 0.81 0.00
216_R 83_I 0.81 0.00
184_Y 186_S 0.81 0.00
200_M 32_V 0.81 0.00
191_E 67_S 0.81 0.00
144_T 110_N 0.80 0.00
71_M 70_L 0.80 0.00
95_L 123_V 0.80 0.00
142_F 18_V 0.80 0.00
61_F 109_G 0.80 0.00
216_R 15_V 0.80 0.00
95_L 154_F 0.79 0.00
210_D 12_V 0.78 0.00
186_Q 33_I 0.78 0.00
88_G 74_E 0.77 0.00
166_K 137_I 0.77 0.00
173_A 176_E 0.77 0.00
135_S 22_P 0.77 0.00
163_K 32_V 0.77 0.00
182_T 70_L 0.77 0.00
156_I 73_A 0.77 0.00
212_K 12_V 0.77 0.00
21_L 22_P 0.76 0.00
55_I 36_P 0.76 0.00
17_S 32_V 0.76 0.00
41_I 117_M 0.76 0.00
113_V 150_L 0.76 0.00
172_T 80_E 0.75 0.00
164_A 114_K 0.75 0.00
54_V 30_A 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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