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OPENSEQ.org

PYRH - RS2
UniProt: P0A7E9 - P0A7V0
Length: 482
Sequences: 702
Seq/Len: 1.51
I_Prob: 0.00

PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
RS2 - 30S ribosomal protein S2
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RS2
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
106_S 33_G 1.21 0.00
106_S 160_A 1.13 0.00
21_L 162_F 1.06 0.00
191_E 79_A 1.03 0.00
192_V 30_F 0.99 0.00
226_L 39_H 0.99 0.00
193_L 5_S 0.98 0.00
75_V 202_G 0.97 0.00
55_I 39_H 0.95 0.00
226_L 79_A 0.93 0.00
107_A 100_M 0.89 0.00
13_L 143_K 0.87 0.00
127_R 223_E 0.87 0.00
215_I 52_E 0.87 0.00
136_A 7_R 0.86 0.00
157_E 5_S 0.86 0.00
95_L 197_D 0.85 0.00
208_A 104_W 0.85 0.00
160_V 143_K 0.85 0.00
46_E 111_I 0.83 0.00
12_I 220_T 0.83 0.00
75_V 28_K 0.83 0.00
50_Q 80_V 0.83 0.00
113_V 89_Q 0.82 0.00
150_C 58_N 0.82 0.00
193_L 223_E 0.82 0.00
233_E 197_D 0.82 0.00
135_S 47_V 0.82 0.00
213_L 167_D 0.81 0.00
120_A 107_V 0.81 0.00
105_M 58_N 0.81 0.00
158_A 218_A 0.80 0.00
202_L 100_M 0.80 0.00
182_T 161_L 0.80 0.00
223_P 67_I 0.80 0.00
142_F 202_G 0.79 0.00
163_K 110_S 0.79 0.00
55_I 110_S 0.79 0.00
20_A 114_L 0.79 0.00
126_L 189_T 0.78 0.00
53_V 171_I 0.78 0.00
169_G 151_I 0.77 0.00
142_F 159_D 0.77 0.00
117_Y 107_V 0.77 0.00
134_L 39_H 0.77 0.00
196_E 57_L 0.77 0.00
165_T 33_G 0.76 0.00
40_E 195_G 0.76 0.00
42_K 74_R 0.76 0.00
75_V 114_L 0.76 0.00
195_K 91_F 0.75 0.00
86_M 209_A 0.75 0.00
135_S 33_G 0.75 0.00
187_L 29_P 0.75 0.00
205_F 139_R 0.75 0.00
239_I 36_N 0.75 0.00
30_D 108_R 0.75 0.00
25_E 163_V 0.75 0.00
97_R 163_V 0.75 0.00
194_E 221_V 0.74 0.00
106_S 110_S 0.74 0.00
211_H 191_S 0.74 0.00
157_E 123_D 0.74 0.00
51_V 153_D 0.73 0.00
65_G 8_D 0.73 0.00
187_L 5_S 0.73 0.00
42_K 153_D 0.73 0.00
177_K 111_I 0.73 0.00
55_I 115_K 0.73 0.00
41_I 79_A 0.72 0.00
34_L 187_V 0.72 0.00
60_L 39_H 0.72 0.00
72_N 50_F 0.72 0.00
199_V 46_T 0.72 0.00
31_A 55_A 0.71 0.00
170_V 163_V 0.71 0.00
215_I 185_A 0.71 0.00
13_L 221_V 0.71 0.00
35_D 127_D 0.71 0.00
20_A 19_Q 0.71 0.00
208_A 90_F 0.71 0.00
105_M 185_A 0.71 0.00
163_K 139_R 0.71 0.00
60_L 29_P 0.71 0.00
165_T 110_S 0.70 0.00
106_S 50_F 0.70 0.00
101_N 117_L 0.70 0.00
192_V 100_M 0.70 0.00
9_Y 46_T 0.70 0.00
26_G 38_V 0.69 0.00
9_Y 177_N 0.69 0.00
188_T 211_T 0.69 0.00
98_A 111_I 0.69 0.00
170_V 92_V 0.69 0.00
135_S 118_E 0.69 0.00
144_T 121_S 0.69 0.00
219_N 164_I 0.69 0.00
106_S 186_I 0.69 0.00
52_G 2_A 0.69 0.00
129_N 146_N 0.69 0.00
193_L 20_T 0.69 0.00
195_K 152_K 0.69 0.00
94_A 211_T 0.69 0.00
205_F 170_H 0.68 0.00
144_T 186_I 0.68 0.00
67_A 186_I 0.68 0.00
9_Y 164_I 0.68 0.00
39_Q 91_F 0.68 0.00
193_L 159_D 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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