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OPENSEQ.org

NDK - YFGM
UniProt: P0A763 - P76576
Length: 349
Sequences: 265
Seq/Len: 0.77
I_Prob: 0.02

NDK - Nucleoside diphosphate kinase
Paralog alert: 0.04 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NDK
YFGM - UPF0070 protein YfgM
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YFGM
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_V 109_A 1.62 0.02
83_V 191_P 1.25 0.01
73_V 32_G 1.23 0.01
57_K 161_A 1.12 0.01
75_S 18_F 1.11 0.01
24_F 181_W 1.11 0.01
89_L 198_Q 1.11 0.01
103_L 74_A 1.09 0.01
131_Y 98_F 1.08 0.01
68_T 43_N 1.07 0.00
25_A 17_F 1.03 0.00
40_L 148_L 1.02 0.00
30_A 132_A 1.01 0.00
2_A 158_A 1.01 0.00
122_V 39_W 1.00 0.00
64_V 178_R 1.00 0.00
131_Y 140_Q 1.00 0.00
99_L 26_A 0.98 0.00
68_T 134_V 0.98 0.00
94_N 133_R 0.98 0.00
88_D 106_K 0.96 0.00
76_V 189_V 0.96 0.00
73_V 196_M 0.95 0.00
34_I 46_Q 0.94 0.00
55_D 205_S 0.93 0.00
83_V 175_Q 0.93 0.00
4_E 178_R 0.93 0.00
86_H 62_T 0.92 0.00
2_A 64_V 0.92 0.00
109_D 42_W 0.89 0.00
60_F 28_G 0.89 0.00
83_V 125_A 0.89 0.00
72_I 34_G 0.88 0.00
46_Q 4_Y 0.88 0.00
103_L 75_A 0.88 0.00
88_D 71_S 0.88 0.00
29_A 17_F 0.88 0.00
25_A 86_Y 0.87 0.00
78_E 39_W 0.87 0.00
73_V 181_W 0.87 0.00
10_I 102_N 0.87 0.00
33_K 162_D 0.87 0.00
94_N 144_A 0.86 0.00
86_H 16_R 0.86 0.00
56_G 38_G 0.86 0.00
25_A 164_R 0.86 0.00
34_I 197_M 0.85 0.00
43_T 140_Q 0.85 0.00
137_E 145_L 0.85 0.00
86_H 75_A 0.85 0.00
17_K 131_L 0.85 0.00
97_N 61_V 0.85 0.00
122_V 189_V 0.84 0.00
65_E 158_A 0.84 0.00
40_L 32_G 0.84 0.00
137_E 171_K 0.84 0.00
22_N 124_K 0.84 0.00
72_I 87_G 0.84 0.00
72_I 127_I 0.83 0.00
35_V 96_Q 0.83 0.00
43_T 71_S 0.83 0.00
138_V 188_D 0.82 0.00
94_N 21_N 0.82 0.00
111_L 70_D 0.81 0.00
139_C 8_N 0.81 0.00
135_E 204_L 0.81 0.00
130_A 165_G 0.80 0.00
134_G 3_I 0.80 0.00
138_V 117_D 0.80 0.00
134_G 195_E 0.80 0.00
24_F 63_A 0.80 0.00
35_V 110_Q 0.79 0.00
94_N 4_Y 0.79 0.00
38_K 10_Q 0.79 0.00
97_N 8_N 0.79 0.00
73_V 97_Q 0.79 0.00
19_V 9_D 0.78 0.00
88_D 126_V 0.78 0.00
33_K 178_R 0.78 0.00
45_E 133_R 0.78 0.00
16_A 53_A 0.78 0.00
103_L 160_V 0.77 0.00
73_V 101_K 0.77 0.00
129_I 115_L 0.77 0.00
43_T 179_S 0.77 0.00
131_Y 42_W 0.76 0.00
89_L 113_Q 0.76 0.00
41_H 58_Q 0.76 0.00
130_A 178_R 0.76 0.00
38_K 48_D 0.76 0.00
43_T 127_I 0.76 0.00
49_G 57_Y 0.76 0.00
107_Y 74_A 0.76 0.00
121_S 37_I 0.76 0.00
55_D 91_S 0.76 0.00
131_Y 161_A 0.75 0.00
140_P 91_S 0.75 0.00
27_F 129_L 0.75 0.00
73_V 42_W 0.75 0.00
45_E 44_S 0.75 0.00
38_K 101_K 0.75 0.00
112_T 163_L 0.74 0.00
29_A 123_L 0.74 0.00
37_T 179_S 0.74 0.00
86_H 54_S 0.74 0.00
88_D 21_N 0.73 0.00
34_I 114_G 0.73 0.00
46_Q 133_R 0.73 0.00
123_E 55_L 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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