May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

YCIB - YCII
UniProt: P0A710 - P0AB55
Length: 277
Sequences: 179
Seq/Len: 0.65
I_Prob: 0.00

YCIB - Probable intracellular septation protein A
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCIB
YCII - Protein YciI
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCII
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
63_G 96_K 1.41 0.00
176_E 73_A 1.34 0.00
66_L 18_L 1.27 0.00
160_I 26_A 1.24 0.00
106_G 34_E 1.21 0.00
169_I 62_I 1.17 0.00
144_N 32_H 1.16 0.00
76_W 3_Y 1.16 0.00
120_N 64_E 1.15 0.00
175_Q 33_D 1.13 0.00
101_I 4_V 1.12 0.00
117_S 33_D 1.11 0.00
50_M 35_G 1.10 0.00
12_V 11_A 1.08 0.00
167_I 70_A 1.08 0.00
125_V 70_A 1.07 0.00
107_K 7_A 1.06 0.00
132_L 23_A 1.06 0.00
175_Q 15_E 1.04 0.00
81_I 12_D 1.04 0.00
119_L 2_L 1.02 0.00
165_S 6_Y 1.02 0.00
53_I 66_E 1.01 0.00
45_R 2_L 1.01 0.00
96_M 4_V 1.00 0.00
70_N 6_Y 1.00 0.00
129_L 77_A 0.99 0.00
22_I 62_I 0.99 0.00
148_N 13_S 0.98 0.00
142_P 39_T 0.96 0.00
16_F 60_T 0.96 0.00
70_N 8_Q 0.95 0.00
51_A 96_K 0.95 0.00
34_A 33_D 0.94 0.00
69_H 13_S 0.94 0.00
21_D 11_A 0.94 0.00
34_A 19_S 0.94 0.00
29_L 60_T 0.93 0.00
132_L 18_L 0.93 0.00
75_K 67_S 0.92 0.00
139_F 23_A 0.92 0.00
96_M 81_V 0.92 0.00
176_E 34_E 0.92 0.00
27_A 13_S 0.91 0.00
166_G 43_M 0.91 0.00
166_G 62_I 0.90 0.00
125_V 30_L 0.90 0.00
169_I 6_Y 0.90 0.00
125_V 19_S 0.90 0.00
171_R 26_A 0.89 0.00
139_F 89_V 0.89 0.00
35_I 70_A 0.89 0.00
41_W 8_Q 0.89 0.00
169_I 4_V 0.89 0.00
80_V 81_V 0.89 0.00
173_M 61_V 0.89 0.00
30_I 13_S 0.89 0.00
109_L 66_E 0.89 0.00
48_E 86_Y 0.89 0.00
159_L 98_F 0.89 0.00
115_V 30_L 0.88 0.00
16_F 43_M 0.88 0.00
72_E 8_Q 0.87 0.00
167_I 88_H 0.86 0.00
47_V 25_L 0.86 0.00
89_L 38_L 0.85 0.00
98_K 66_E 0.85 0.00
15_A 23_A 0.85 0.00
107_K 62_I 0.85 0.00
90_L 12_D 0.84 0.00
159_L 76_D 0.84 0.00
24_A 12_D 0.84 0.00
4_F 19_S 0.83 0.00
6_D 52_G 0.83 0.00
38_I 38_L 0.83 0.00
45_R 26_A 0.82 0.00
91_V 62_I 0.82 0.00
163_L 98_F 0.81 0.00
108_E 39_T 0.81 0.00
89_L 43_M 0.80 0.00
121_L 91_V 0.80 0.00
165_S 2_L 0.80 0.00
45_R 22_P 0.80 0.00
103_R 2_L 0.80 0.00
139_F 70_A 0.80 0.00
67_F 2_L 0.80 0.00
36_V 2_L 0.79 0.00
24_A 32_H 0.79 0.00
111_L 62_I 0.79 0.00
88_A 26_A 0.78 0.00
164_L 73_A 0.78 0.00
172_H 33_D 0.78 0.00
42_V 77_A 0.78 0.00
45_R 53_A 0.78 0.00
1_M 65_F 0.78 0.00
161_F 2_L 0.77 0.00
171_R 12_D 0.77 0.00
141_L 29_Q 0.77 0.00
88_A 29_Q 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0963 seconds.