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OPENSEQ.org

HYPA - HYPE
UniProt: P0A700 - P24193
Length: 452
Sequences: 407
Seq/Len: 0.92
I_Prob: 0.00

HYPA - Protein HypA
Paralog alert: 0.48 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: HYBF HYPA
HYPE - Hydrogenase isoenzymes formation protein HypE
Paralog alert: 0.79 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: HYPE SELD THIL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_V 281_R 1.20 0.00
49_D 184_L 1.18 0.00
102_A 100_L 1.11 0.00
29_V 163_T 1.08 0.00
4_I 183_I 1.00 0.00
29_V 85_A 0.96 0.00
14_I 62_I 0.95 0.00
37_S 4_I 0.95 0.00
67_Q 41_L 0.95 0.00
112_E 113_V 0.93 0.00
49_D 242_I 0.92 0.00
14_I 300_A 0.90 0.00
31_L 118_E 0.89 0.00
95_G 228_N 0.88 0.00
5_T 310_K 0.87 0.00
5_T 330_E 0.86 0.00
44_L 56_S 0.85 0.00
37_S 104_L 0.85 0.00
70_E 211_R 0.85 0.00
7_C 234_F 0.85 0.00
29_V 22_L 0.84 0.00
14_I 86_V 0.84 0.00
37_S 178_D 0.84 0.00
41_T 182_T 0.83 0.00
108_I 169_V 0.83 0.00
105_G 92_R 0.83 0.00
42_S 216_V 0.82 0.00
46_F 274_K 0.81 0.00
6_L 163_T 0.81 0.00
54_G 306_V 0.81 0.00
75_T 305_E 0.81 0.00
75_T 6_L 0.80 0.00
80_V 14_A 0.80 0.00
89_R 244_L 0.78 0.00
49_D 159_W 0.78 0.00
61_K 292_H 0.77 0.00
10_A 244_L 0.77 0.00
66_E 302_L 0.76 0.00
110_R 184_L 0.75 0.00
104_D 24_M 0.75 0.00
70_E 93_Y 0.75 0.00
6_L 307_V 0.75 0.00
6_L 280_E 0.74 0.00
61_K 285_E 0.74 0.00
47_C 274_K 0.74 0.00
112_E 170_L 0.73 0.00
102_A 306_V 0.73 0.00
16_Q 171_L 0.73 0.00
33_I 62_I 0.73 0.00
106_L 265_D 0.73 0.00
14_I 230_V 0.73 0.00
51_V 119_T 0.72 0.00
33_I 249_L 0.72 0.00
108_I 173_S 0.72 0.00
60_C 291_L 0.72 0.00
108_I 107_E 0.72 0.00
94_H 324_L 0.71 0.00
100_I 227_V 0.71 0.00
107_Q 309_R 0.71 0.00
105_G 25_E 0.71 0.00
66_E 184_L 0.71 0.00
111_I 5_Q 0.71 0.00
29_V 292_H 0.71 0.00
102_A 97_G 0.71 0.00
51_V 78_C 0.71 0.00
86_R 291_L 0.71 0.00
26_V 143_L 0.71 0.00
109_R 207_I 0.71 0.00
36_F 74_K 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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