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OPENSEQ.org

FABZ - LPXD
UniProt: P0A6Q6 - P21645
Length: 492
Sequences: 567
Seq/Len: 1.18
I_Prob: 0.00

FABZ - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
Paralog alert: 0.18 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: FABA FABZ
LPXD - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
Paralog alert: 0.09 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: LPXD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
140_E 319_L 1.18 0.00
23_F 88_Q 1.12 0.00
137_V 112_L 1.11 0.00
32_F 160_I 1.09 0.00
138_V 328_K 1.08 0.00
26_V 243_I 1.06 0.00
116_T 291_V 1.05 0.00
74_T 221_D 1.01 0.00
60_I 288_M 0.99 0.00
145_C 252_G 0.99 0.00
95_G 289_G 0.97 0.00
126_R 268_G 0.97 0.00
115_V 185_Y 0.96 0.00
129_G 196_P 0.91 0.00
30_L 209_I 0.91 0.00
45_S 287_G 0.90 0.00
26_V 172_I 0.87 0.00
116_T 60_V 0.87 0.00
58_K 238_A 0.85 0.00
96_I 228_G 0.84 0.00
14_L 17_L 0.81 0.00
102_K 322_N 0.80 0.00
95_G 58_A 0.79 0.00
93_F 219_A 0.78 0.00
67_L 212_C 0.78 0.00
123_G 265_C 0.78 0.00
100_R 48_R 0.77 0.00
76_I 71_S 0.77 0.00
102_K 60_V 0.77 0.00
139_C 203_I 0.77 0.00
39_R 331_K 0.77 0.00
40_A 12_Q 0.77 0.00
44_V 61_M 0.77 0.00
100_R 186_A 0.76 0.00
24_L 39_I 0.75 0.00
113_M 48_R 0.75 0.00
78_A 288_M 0.75 0.00
87_P 46_K 0.75 0.00
8_L 231_I 0.75 0.00
66_I 105_V 0.75 0.00
135_G 125_E 0.75 0.00
26_V 9_L 0.75 0.00
61_F 230_I 0.74 0.00
67_L 98_Q 0.74 0.00
125_T 78_N 0.74 0.00
16_L 306_P 0.74 0.00
90_L 283_V 0.74 0.00
140_E 181_D 0.73 0.00
67_L 119_G 0.73 0.00
144_M 256_A 0.73 0.00
145_C 192_W 0.73 0.00
118_E 330_L 0.73 0.00
138_V 51_L 0.73 0.00
14_L 198_I 0.72 0.00
111_M 259_L 0.72 0.00
140_E 236_Q 0.72 0.00
40_A 304_G 0.72 0.00
104_P 6_L 0.71 0.00
122_R 80_Y 0.71 0.00
70_M 139_G 0.71 0.00
94_A 294_P 0.71 0.00
103_R 142_V 0.71 0.00
46_V 235_C 0.70 0.00
70_M 65_D 0.70 0.00
122_R 214_T 0.70 0.00
75_G 271_S 0.70 0.00
145_C 1_M 0.70 0.00
28_R 57_S 0.69 0.00
126_R 293_R 0.69 0.00
10_I 89_I 0.69 0.00
52_Q 148_I 0.69 0.00
129_G 47_Y 0.68 0.00
21_F 156_A 0.68 0.00
148_S 249_V 0.68 0.00
75_G 238_A 0.68 0.00
95_G 6_L 0.68 0.00
123_G 170_C 0.68 0.00
106_V 172_I 0.68 0.00
144_M 319_L 0.68 0.00
127_F 218_G 0.68 0.00
26_V 166_I 0.68 0.00
41_V 28_V 0.68 0.00
52_Q 125_E 0.68 0.00
137_V 156_A 0.67 0.00
100_R 36_T 0.67 0.00
61_F 274_N 0.67 0.00
26_V 59_V 0.67 0.00
52_Q 27_G 0.67 0.00
40_A 285_V 0.66 0.00
102_K 268_G 0.66 0.00
75_G 124_I 0.66 0.00
146_A 164_I 0.66 0.00
104_P 79_P 0.65 0.00
14_L 60_V 0.65 0.00
93_F 228_G 0.65 0.00
123_G 192_W 0.65 0.00
139_C 128_V 0.65 0.00
102_K 310_N 0.65 0.00
94_A 298_P 0.65 0.00
143_M 287_G 0.65 0.00
17_L 230_I 0.65 0.00
122_R 250_A 0.65 0.00
76_I 101_A 0.65 0.00
14_L 89_I 0.65 0.00
78_A 270_A 0.65 0.00
129_G 61_M 0.65 0.00
67_L 52_G 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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