May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CYSC - CYSH
UniProt: P0A6J1 - P17854
Length: 445
Sequences: 449
Seq/Len: 1.09
I_Prob: 0.26

CYSC - Adenylyl-sulfate kinase
Paralog alert: 0.16 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CYSC
CYSH - Phosphoadenosine phosphosulfate reductase
Paralog alert: 0.67 [within 20: 0.27] - ratio of genomes with paralogs
Cluster includes: CYSH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
139_C 44_L 1.70 0.26
156_L 87_Y 1.30 0.09
72_C 170_L 1.16 0.06
156_L 44_L 1.13 0.05
47_A 37_V 1.06 0.04
156_L 107_T 1.04 0.04
139_C 135_N 1.03 0.04
118_V 200_K 1.03 0.04
189_L 89_F 1.01 0.03
135_P 194_L 0.98 0.03
156_L 135_N 0.97 0.03
152_R 133_D 0.96 0.03
153_A 206_D 0.96 0.03
140_E 133_D 0.94 0.03
47_A 77_T 0.94 0.03
15_V 221_W 0.93 0.02
176_L 89_F 0.92 0.02
139_C 85_E 0.92 0.02
144_P 109_S 0.91 0.02
29_V 138_E 0.90 0.02
25_G 169_V 0.89 0.02
186_V 138_E 0.89 0.02
72_C 130_K 0.88 0.02
81_D 190_I 0.88 0.02
8_V 198_G 0.87 0.02
6_E 139_P 0.85 0.02
26_H 66_N 0.85 0.02
97_V 129_E 0.84 0.02
173_E 70_P 0.83 0.02
149_K 37_V 0.83 0.02
28_G 215_T 0.83 0.02
157_R 196_K 0.83 0.02
149_K 232_F 0.83 0.02
168_A 91_D 0.82 0.02
188_Q 221_W 0.82 0.01
174_I 182_I 0.82 0.01
193_L 62_L 0.82 0.01
179_E 206_D 0.81 0.01
140_E 141_N 0.81 0.01
22_L 177_F 0.81 0.01
134_T 153_F 0.79 0.01
90_G 100_N 0.76 0.01
79_D 61_S 0.76 0.01
78_S 108_E 0.76 0.01
156_L 182_I 0.76 0.01
94_N 50_L 0.76 0.01
168_A 85_E 0.76 0.01
155_E 50_L 0.75 0.01
126_R 70_P 0.75 0.01
12_S 70_P 0.75 0.01
184_N 147_L 0.74 0.01
168_A 108_E 0.74 0.01
96_M 75_I 0.74 0.01
29_V 77_T 0.74 0.01
15_V 41_L 0.73 0.01
190_L 100_N 0.73 0.01
189_L 119_K 0.73 0.01
93_A 98_K 0.73 0.01
120_E 74_V 0.73 0.01
182_V 47_E 0.73 0.01
44_V 37_V 0.72 0.01
134_T 169_V 0.72 0.01
23_H 97_L 0.72 0.01
81_D 153_F 0.71 0.01
185_L 44_L 0.71 0.01
69_H 49_V 0.71 0.01
183_T 190_I 0.71 0.01
174_I 54_F 0.70 0.01
157_R 37_V 0.70 0.01
152_R 33_A 0.70 0.01
177_N 87_Y 0.70 0.01
106_A 87_Y 0.70 0.01
72_C 209_Y 0.70 0.01
153_A 41_L 0.70 0.01
120_E 182_I 0.70 0.01
15_V 63_H 0.69 0.01
149_K 196_K 0.69 0.01
96_M 102_K 0.69 0.01
54_K 94_T 0.69 0.01
103_V 66_N 0.69 0.01
105_T 87_Y 0.69 0.01
182_V 37_V 0.69 0.01
78_S 170_L 0.69 0.01
112_R 203_P 0.69 0.01
132_V 197_H 0.69 0.01
144_P 89_F 0.68 0.01
105_T 134_I 0.68 0.01
44_V 194_L 0.68 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1079 seconds.