May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ACP - FABF
UniProt: P0A6A8 - P0AAI5
Length: 491
Sequences: 1242
Seq/Len: 2.55
I_Prob: 0.00

ACP - Acyl carrier protein
Paralog alert: 0.32 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ACP
FABF - 3-oxoacyl-[acyl-carrier-protein] synthase 2
Paralog alert: 0.57 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: FABB FABF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_D 66_K 0.80 0.00
49_E 129_K 0.79 0.00
4_I 399_F 0.76 0.00
49_E 125_G 0.73 0.00
60_A 207_R 0.71 0.00
20_Q 48_T 0.71 0.00
22_E 301_V 0.68 0.00
42_E 131_S 0.67 0.00
46_A 404_T 0.67 0.00
52_D 196_T 0.65 0.00
22_E 286_N 0.65 0.00
12_I 50_F 0.62 0.00
76_H 348_A 0.62 0.00
72_Y 135_V 0.60 0.00
27_A 40_H 0.60 0.00
49_E 141_N 0.60 0.00
21_E 289_R 0.60 0.00
77_Q 259_V 0.59 0.00
64_T 71_M 0.59 0.00
57_D 206_A 0.59 0.00
19_K 26_K 0.58 0.00
52_D 27_A 0.57 0.00
42_E 132_P 0.57 0.00
70_I 396_C 0.57 0.00
26_N 296_S 0.57 0.00
67_Q 35_I 0.56 0.00
12_I 154_R 0.56 0.00
66_V 213_N 0.56 0.00
41_V 368_N 0.56 0.00
77_Q 124_N 0.55 0.00
40_T 70_K 0.55 0.00
59_E 290_D 0.55 0.00
23_V 393_Y 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0585 seconds.