May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CHER - CHEW
UniProt: P07364 - P0A964
Length: 453
Sequences: 848
Seq/Len: 2.04
I_Prob: 0.10

CHER - Chemotaxis protein methyltransferase
Paralog alert: 0.36 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CHER
CHEW - Chemotaxis protein CheW
Paralog alert: 0.58 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: CHEW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
89_L 102_V 1.32 0.10
130_P 31_I 1.13 0.06
73_L 115_Q 1.07 0.05
54_L 58_V 1.04 0.04
281_Y 46_T 1.01 0.04
184_Y 69_V 0.98 0.04
118_R 27_E 0.95 0.03
123_A 98_V 0.94 0.03
241_Q 84_D 0.92 0.03
183_R 44_Q 0.91 0.03
125_S 108_V 0.90 0.03
133_I 50_N 0.90 0.03
277_G 40_R 0.89 0.03
91_T 21_V 0.88 0.03
73_L 36_V 0.88 0.03
23_S 48_I 0.88 0.03
27_F 39_I 0.87 0.02
119_V 116_I 0.87 0.02
263_S 142_L 0.86 0.02
100_A 30_G 0.85 0.02
87_N 58_V 0.85 0.02
166_G 65_I 0.85 0.02
207_D 111_L 0.85 0.02
136_T 107_D 0.85 0.02
118_R 74_K 0.84 0.02
241_Q 111_L 0.84 0.02
273_F 37_Q 0.83 0.02
132_S 123_A 0.81 0.02
156_D 20_L 0.81 0.02
166_G 27_E 0.80 0.02
68_H 31_I 0.80 0.02
203_A 148_E 0.80 0.02
132_S 141_M 0.79 0.02
246_R 81_D 0.79 0.02
123_A 132_T 0.79 0.02
53_R 61_L 0.79 0.02
85_F 41_G 0.78 0.02
99_E 123_A 0.78 0.02
229_C 150_L 0.78 0.02
149_K 54_F 0.77 0.02
254_P 119_A 0.77 0.02
198_V 158_L 0.77 0.02
152_A 101_V 0.77 0.02
53_R 33_I 0.77 0.02
200_Q 83_N 0.77 0.02
166_G 24_L 0.76 0.02
89_L 149_K 0.76 0.02
137_L 71_L 0.76 0.02
165_S 138_G 0.76 0.02
85_F 92_N 0.76 0.02
215_A 91_L 0.75 0.02
100_A 59_T 0.75 0.01
137_L 98_V 0.75 0.01
94_T 22_F 0.74 0.01
198_V 131_L 0.74 0.01
123_A 133_G 0.74 0.01
86_I 83_N 0.74 0.01
251_L 121_E 0.74 0.01
241_Q 74_K 0.73 0.01
203_A 137_L 0.73 0.01
261_G 32_D 0.73 0.01
32_Q 139_D 0.73 0.01
213_L 142_L 0.73 0.01
149_K 48_I 0.73 0.01
101_H 42_Y 0.73 0.01
150_V 36_V 0.73 0.01
96_F 65_I 0.73 0.01
86_I 72_R 0.73 0.01
108_D 149_K 0.73 0.01
94_T 75_F 0.73 0.01
206_V 124_V 0.73 0.01
65_D 152_N 0.72 0.01
218_Y 40_R 0.72 0.01
132_S 132_T 0.72 0.01
40_I 54_F 0.72 0.01
119_V 148_E 0.72 0.01
233_M 33_I 0.72 0.01
155_I 60_N 0.72 0.01
268_H 79_D 0.72 0.01
116_E 114_E 0.71 0.01
102_H 87_V 0.71 0.01
86_I 76_S 0.71 0.01
62_G 138_G 0.71 0.01
112_R 76_S 0.71 0.01
51_Y 40_R 0.71 0.01
183_R 98_V 0.71 0.01
196_V 88_V 0.71 0.01
34_I 135_G 0.71 0.01
142_G 139_D 0.70 0.01
95_A 40_R 0.70 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0463 seconds.