| UniProt: | P0A964 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10149 | ||
| Length: | 167 (150) | ||
| Sequences: | 2407 | ||
| Seq/Len: | 16.05 |
| CHEW
Paralog alert: 0.58 [within 20: 0.15] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 28_E | 140_R | 3.516 | 1.00 | |
| 117_R | 136_A | 3.46 | 1.00 | |
| 88_V | 99_G | 2.941 | 1.00 | |
| 56_K | 70_D | 2.517 | 1.00 | |
| 72_R | 103_D | 2.393 | 1.00 | |
| 116_I | 133_G | 2.387 | 1.00 | |
| 111_L | 135_G | 2.319 | 1.00 | |
| 35_K | 148_E | 2.3 | 1.00 | |
| 38_E | 62_R | 2.284 | 1.00 | |
| 56_K | 101_V | 2.209 | 1.00 | |
| 56_K | 73_I | 2.209 | 1.00 | |
| 112_T | 115_Q | 2.058 | 1.00 | |
| 68_I | 88_V | 1.995 | 1.00 | |
| 18_E | 110_S | 1.87 | 1.00 | |
| 91_L | 100_I | 1.84 | 1.00 | |
| 37_Q | 92_N | 1.804 | 1.00 | |
| 42_Y | 45_V | 1.794 | 1.00 | |
| 80_V | 83_N | 1.748 | 1.00 | |
| 41_G | 87_V | 1.613 | 1.00 | |
| 137_L | 140_R | 1.534 | 1.00 | |
| 22_F | 89_I | 1.512 | 1.00 | |
| 132_T | 146_N | 1.507 | 1.00 | |
| 146_N | 149_K | 1.484 | 1.00 | |
| 60_N | 65_I | 1.461 | 1.00 | |
| 131_L | 143_I | 1.423 | 1.00 | |
| 71_L | 150_L | 1.407 | 0.99 | |
| 42_Y | 101_V | 1.405 | 0.99 | |
| 155_E | 159_L | 1.385 | 0.99 | |
| 86_T | 101_V | 1.384 | 0.99 | |
| 102_V | 105_V | 1.364 | 0.99 | |
| 23_T | 104_G | 1.344 | 0.99 | |
| 129_E | 149_K | 1.339 | 0.99 | |
| 73_I | 79_D | 1.317 | 0.99 | |
| 29_Y | 127_S | 1.315 | 0.99 | |
| 53_A | 73_I | 1.309 | 0.99 | |
| 83_N | 86_T | 1.307 | 0.99 | |
| 17_Q | 32_D | 1.301 | 0.99 | |
| 82_Y | 86_T | 1.288 | 0.99 | |
| 68_I | 99_G | 1.265 | 0.99 | |
| 133_G | 144_L | 1.246 | 0.98 | |
| 59_T | 68_I | 1.221 | 0.98 | |
| 66_V | 97_V | 1.215 | 0.98 | |
| 20_L | 87_V | 1.207 | 0.98 | |
| 23_T | 26_D | 1.205 | 0.98 | |
| 60_N | 63_G | 1.201 | 0.98 | |
| 134_L | 141_M | 1.2 | 0.98 | |
| 27_E | 131_L | 1.195 | 0.98 | |
| 19_F | 135_G | 1.193 | 0.98 | |
| 40_R | 61_L | 1.169 | 0.97 | |
| 24_L | 42_Y | 1.163 | 0.97 | |
| 91_L | 150_L | 1.141 | 0.97 | |
| 30_G | 144_L | 1.124 | 0.97 | |
| 45_V | 68_I | 1.121 | 0.97 | |
| 152_N | 155_E | 1.099 | 0.96 | |
| 70_D | 80_V | 1.082 | 0.96 | |
| 40_R | 43_D | 1.081 | 0.95 | |
| 157_A | 161_S | 1.08 | 0.95 | |
| 28_E | 106_S | 1.071 | 0.95 | |
| 56_K | 82_Y | 1.061 | 0.95 | |
| 115_Q | 137_L | 1.045 | 0.94 | |
| 19_F | 144_L | 1.035 | 0.94 | |
| 92_N | 97_V | 1.021 | 0.93 | |
| 37_Q | 64_V | 1.012 | 0.93 | |
| 22_F | 38_E | 1.009 | 0.93 | |
| 33_I | 40_R | 1.008 | 0.93 | |
| 40_R | 105_V | 1.006 | 0.93 | |
| 21_V | 28_E | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2ho9A | 1 | 1 | 100 | 0.23 | Contact Map | 0.618 |
| 2qdlA | 2 | 0.9641 | 100 | 0.312 | Contact Map | 0.803 |
| 4jpbW | 1 | 0.8802 | 100 | 0.323 | Contact Map | 0.711 |
| 3ur1B | 1 | 0.8323 | 100 | 0.333 | Contact Map | 0.605 |
| 1b3qA | 2 | 0.8443 | 99.5 | 0.65 | Contact Map | 0.54 |
| 2b29A | 1 | 0.6826 | 5.9 | 0.946 | Contact Map | 0.263 |
| 4ipcA | 1 | 0.6826 | 4.7 | 0.948 | Contact Map | 0.256 |
| 1wi9A | 1 | 0.4192 | 4.3 | 0.949 | Contact Map | 0.121 |
| 2igpA | 1 | 0.3892 | 2.1 | 0.957 | Contact Map | 0.037 |
| 3g3oA | 1 | 0.491 | 1.8 | 0.958 | Contact Map | 0.029 |
Sequence Conservation (Image Generated using WebLogo v3)