May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CHEB - CHER
UniProt: P07330 - P07364
Length: 635
Sequences: 881
Seq/Len: 1.45
I_Prob: 0.00

CHEB - Chemotaxis response regulator protein-glutamate methylesterase
Paralog alert: 0.35 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: CHEB
CHER - Chemotaxis protein methyltransferase
Paralog alert: 0.36 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CHER
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
230_G 53_R 1.17 0.00
84_S 125_S 1.01 0.00
42_R 93_L 0.98 0.00
255_R 93_L 0.97 0.00
24_N 117_Y 0.91 0.00
256_H 52_N 0.90 0.00
184_A 274_T 0.89 0.00
58_E 92_N 0.86 0.00
202_R 40_I 0.86 0.00
256_H 262_H 0.86 0.00
256_H 102_H 0.86 0.00
168_T 93_L 0.85 0.00
232_R 173_L 0.84 0.00
236_L 73_L 0.83 0.00
192_P 53_R 0.83 0.00
123_I 117_Y 0.83 0.00
302_L 283_L 0.82 0.00
316_R 244_I 0.79 0.00
192_P 92_N 0.79 0.00
31_M 248_F 0.78 0.00
256_H 91_T 0.78 0.00
82_V 229_C 0.78 0.00
57_V 46_K 0.78 0.00
279_I 262_H 0.78 0.00
216_D 243_E 0.78 0.00
213_E 53_R 0.78 0.00
236_L 84_A 0.77 0.00
280_L 248_F 0.77 0.00
191_M 53_R 0.77 0.00
245_I 150_V 0.77 0.00
202_R 53_R 0.77 0.00
141_L 227_I 0.76 0.00
330_L 240_T 0.76 0.00
214_A 106_L 0.75 0.00
269_K 115_G 0.75 0.00
168_T 99_E 0.74 0.00
215_E 201_E 0.74 0.00
65_L 36_Q 0.74 0.00
32_V 244_I 0.74 0.00
88_K 162_K 0.74 0.00
259_S 228_F 0.74 0.00
308_S 132_S 0.74 0.00
155_S 121_S 0.73 0.00
163_A 210_P 0.73 0.00
232_R 115_G 0.73 0.00
72_M 57_R 0.72 0.00
65_L 135_M 0.72 0.00
309_C 135_M 0.72 0.00
58_E 91_T 0.72 0.00
230_G 46_K 0.72 0.00
178_L 93_L 0.72 0.00
66_D 150_V 0.71 0.00
169_E 91_T 0.71 0.00
308_S 200_Q 0.71 0.00
254_N 102_H 0.71 0.00
141_L 204_N 0.71 0.00
161_I 150_V 0.70 0.00
308_S 63_L 0.70 0.00
210_G 198_V 0.70 0.00
199_F 94_T 0.70 0.00
238_R 254_P 0.70 0.00
255_R 103_F 0.69 0.00
126_K 185_F 0.69 0.00
199_F 102_H 0.69 0.00
309_C 257_L 0.69 0.00
256_H 58_L 0.69 0.00
288_A 69_Y 0.69 0.00
67_F 91_T 0.69 0.00
163_A 93_L 0.69 0.00
226_Y 259_F 0.69 0.00
183_P 236_F 0.69 0.00
308_S 202_L 0.69 0.00
81_M 156_D 0.69 0.00
69_E 233_M 0.68 0.00
278_V 226_A 0.68 0.00
227_I 130_P 0.68 0.00
123_I 197_R 0.68 0.00
304_Q 52_N 0.68 0.00
230_G 91_T 0.68 0.00
202_R 92_N 0.68 0.00
110_L 61_L 0.67 0.00
14_L 103_F 0.67 0.00
17_Q 65_D 0.67 0.00
236_L 107_A 0.67 0.00
327_V 245_L 0.67 0.00
304_Q 247_R 0.67 0.00
194_G 248_F 0.67 0.00
278_V 178_P 0.66 0.00
230_G 241_Q 0.66 0.00
99_L 156_D 0.66 0.00
181_S 152_A 0.66 0.00
34_T 135_M 0.66 0.00
162_G 229_C 0.66 0.00
276_V 123_A 0.66 0.00
32_V 150_V 0.66 0.00
315_P 229_C 0.66 0.00
264_F 103_F 0.66 0.00
312_F 155_I 0.66 0.00
63_D 139_D 0.66 0.00
168_T 233_M 0.66 0.00
202_R 171_E 0.66 0.00
54_T 103_F 0.66 0.00
230_G 92_N 0.66 0.00
5_R 112_R 0.65 0.00
71_L 181_L 0.65 0.00
242_N 229_C 0.65 0.00
219_R 202_L 0.65 0.00
245_I 132_S 0.65 0.00
80_V 49_M 0.65 0.00
337_M 283_L 0.65 0.00
65_L 201_E 0.65 0.00
183_P 39_G 0.65 0.00
304_Q 102_H 0.65 0.00
279_I 121_S 0.65 0.00
191_M 155_I 0.65 0.00
234_M 217_Q 0.65 0.00
321_M 227_I 0.65 0.00
53_L 132_S 0.65 0.00
312_F 175_N 0.64 0.00
67_F 99_E 0.64 0.00
263_L 49_M 0.64 0.00
52_V 177_T 0.64 0.00
143_A 65_D 0.64 0.00
234_M 233_M 0.64 0.00
187_I 155_I 0.64 0.00
335_Q 114_S 0.64 0.00
14_L 261_G 0.64 0.00
156_E 160_L 0.63 0.00
218_E 89_L 0.63 0.00
10_D 92_N 0.63 0.00
185_L 176_L 0.63 0.00
186_L 157_T 0.63 0.00
8_S 82_W 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0492 seconds.