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OPENSEQ.org
TTDA - TTDB
UniProt: P05847 - P0AC35
Length: 504
Sequences: 388
Seq/Len: 0.81
I_Prob: 0.44
TTDA - L(+)-tartrate dehydratase subunit alpha
Paralog alert: 0.34 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TTDA 		TTDB - L(+)-tartrate dehydratase subunit beta
Paralog alert: 0.35 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TTDB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
55_T 124_P 1.92 0.44
66_L 133_T 1.77 0.34
68_R 132_A 1.42 0.14
168_S 85_S 1.41 0.13
154_G 167_I 1.26 0.08
218_I 108_L 1.24 0.08
189_A 85_S 1.22 0.07
145_A 113_C 1.22 0.07
141_D 68_D 1.19 0.06
246_Q 124_P 1.18 0.06
256_G 25_L 1.16 0.06
183_S 179_K 1.16 0.06
264_R 167_I 1.16 0.06
133_W 68_D 1.12 0.05
37_L 7_T 1.11 0.05
52_I 164_I 1.11 0.05
82_K 108_L 1.11 0.05
58_D 134_Q 1.08 0.04
120_E 68_D 1.08 0.04
50_K 41_I 1.07 0.04
264_R 173_N 1.05 0.04
135_T 68_D 1.03 0.04
68_R 70_W 1.02 0.03
39_Q 25_L 1.01 0.03
189_A 9_I 0.99 0.03
257_V 160_F 0.99 0.03
81_V 52_N 0.98 0.03
258_H 173_N 0.98 0.03
89_L 169_T 0.97 0.03
140_P 68_D 0.96 0.03
107_K 141_V 0.96 0.03
179_F 182_F 0.95 0.03
30_P 24_Y 0.94 0.02
246_Q 65_K 0.94 0.02
225_P 15_Q 0.94 0.02
72_Q 76_G 0.94 0.02
205_T 135_V 0.93 0.02
83_V 26_T 0.93 0.02
165_L 58_H 0.92 0.02
62_K 129_V 0.92 0.02
72_Q 120_H 0.92 0.02
86_R 26_T 0.92 0.02
195_V 6_T 0.91 0.02
179_F 18_R 0.90 0.02
177_F 59_A 0.90 0.02
260_E 74_S 0.89 0.02
191_P 83_M 0.89 0.02
50_K 139_E 0.89 0.02
96_I 129_V 0.88 0.02
142_N 68_D 0.88 0.02
197_V 43_L 0.88 0.02
261_S 153_W 0.88 0.02
226_K 149_P 0.88 0.02
212_K 25_L 0.88 0.02
204_E 90_F 0.87 0.02
211_R 125_A 0.87 0.02
180_E 159_E 0.87 0.02
172_E 176_A 0.87 0.02
113_N 105_M 0.87 0.02
279_A 112_G 0.87 0.02
182_I 119_L 0.86 0.02
203_V 39_R 0.86 0.02
122_N 150_E 0.86 0.02
97_L 106_G 0.86 0.02
248_L 124_P 0.85 0.02
49_G 143_W 0.85 0.02
30_P 163_L 0.85 0.02
234_L 49_Y 0.85 0.02
89_L 106_G 0.84 0.02
142_N 67_G 0.84 0.02
218_I 65_K 0.83 0.01
222_H 5_L 0.83 0.01
187_V 104_G 0.83 0.01
101_V 145_E 0.83 0.01
182_I 57_F 0.82 0.01
210_S 149_P 0.82 0.01
135_T 1_M 0.82 0.01
221_R 130_L 0.82 0.01
49_G 160_F 0.82 0.01
116_E 5_L 0.82 0.01
254_V 167_I 0.82 0.01
55_T 130_L 0.82 0.01
218_I 91_I 0.81 0.01
156_C 125_A 0.81 0.01
276_G 59_A 0.81 0.01
234_L 91_I 0.81 0.01
206_A 80_S 0.81 0.01
236_E 12_E 0.81 0.01
224_N 80_S 0.81 0.01
236_E 145_E 0.80 0.01
69_P 157_V 0.80 0.01
97_L 90_F 0.80 0.01
189_A 104_G 0.80 0.01
251_N 7_T 0.80 0.01
204_E 163_L 0.80 0.01
161_R 104_G 0.80 0.01
79_F 182_F 0.80 0.01
269_I 90_F 0.79 0.01
16_E 111_E 0.79 0.01
268_T 167_I 0.79 0.01
246_Q 59_A 0.79 0.01
100_A 144_T 0.79 0.01
194_L 91_I 0.78 0.01
95_S 52_N 0.78 0.01
142_N 63_V 0.78 0.01
172_E 62_I 0.78 0.01
273_V 183_A 0.78 0.01
174_V 160_F 0.78 0.01
140_P 67_G 0.77 0.01
167_P 146_L 0.77 0.01
133_W 1_M 0.77 0.01
236_E 184_E 0.77 0.01
69_P 147_G 0.77 0.01
94_Q 135_V 0.77 0.01
169_E 91_I 0.77 0.01
204_E 96_V 0.77 0.01
40_L 41_I 0.76 0.01
193_V 141_V 0.76 0.01
237_G 163_L 0.76 0.01
16_E 52_N 0.76 0.01
113_N 84_E 0.76 0.01
230_L 172_N 0.76 0.01
197_V 143_W 0.76 0.01
222_H 45_R 0.76 0.01
45_T 184_E 0.76 0.01
197_V 41_I 0.76 0.01
212_K 96_V 0.76 0.01
38_K 16_D 0.75 0.01
287_V 56_I 0.75 0.01
81_V 46_P 0.75 0.01
49_G 164_I 0.75 0.01
228_A 138_I 0.75 0.01
61_Q 55_A 0.75 0.01
119_D 5_L 0.75 0.01
62_K 128_A 0.75 0.01
233_R 152_L 0.75 0.01
286_L 75_V 0.75 0.01
61_Q 46_P 0.75 0.01
203_V 145_E 0.75 0.01
47_S 182_F 0.74 0.01
77_I 104_G 0.74 0.01
140_P 63_V 0.74 0.01
35_D 135_V 0.74 0.01
176_K 114_Q 0.74 0.01
246_Q 179_K 0.74 0.01
180_E 12_E 0.74 0.01
202_S 71_E 0.74 0.01
153_G 33_R 0.74 0.01
122_N 1_M 0.73 0.01
167_P 61_P 0.73 0.01
212_K 135_V 0.73 0.01
70_A 128_A 0.73 0.01
43_A 117_K 0.73 0.01
224_N 59_A 0.73 0.01
246_Q 24_Y 0.73 0.01
180_E 136_E 0.73 0.01
209_L 181_L 0.73 0.01
232_L 12_E 0.72 0.01
157_T 57_F 0.72 0.01
61_Q 50_D 0.72 0.01
267_S 57_F 0.72 0.01
104_A 63_V 0.72 0.01
8_Q 6_T 0.72 0.01
147_I 154_V 0.71 0.01
246_Q 54_K 0.71 0.01
169_E 87_E 0.71 0.01
210_S 118_A 0.71 0.01
25_I 122_I 0.71 0.01
189_A 128_A 0.71 0.01
240_R 29_L 0.71 0.01
210_S 119_L 0.71 0.01
267_S 75_V 0.71 0.01
10_A 19_V 0.71 0.01
66_L 72_M 0.71 0.01
86_R 15_Q 0.71 0.01
56_M 166_S 0.71 0.01
204_E 183_A 0.71 0.01
259_I 71_E 0.70 0.01
264_R 110_E 0.70 0.01
135_T 63_V 0.70 0.01
167_P 83_M 0.70 0.01
12_N 43_L 0.70 0.01
256_G 5_L 0.70 0.01
49_G 170_H 0.70 0.01
137_D 51_L 0.70 0.01
47_S 24_Y 0.70 0.01
240_R 107_P 0.70 0.01
276_G 178_N 0.70 0.01
31_D 111_E 0.70 0.01
161_R 12_E 0.69 0.01
104_A 62_I 0.69 0.01
76_E 167_I 0.69 0.01
15_T 108_L 0.69 0.01
15_T 115_K 0.69 0.01
284_T 59_A 0.69 0.01
133_W 63_V 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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