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OPENSEQ.org

PABB - YBIB
UniProt: P05041 - P30177
Length: 773
Sequences: 814
Seq/Len: 1.08
I_Prob: 0.00

PABB - Para-aminobenzoate synthase component 1
Paralog alert: 0.54 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PABB TRPE
YBIB - Uncharacterized protein YbiB
Paralog alert: 0.33 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YBIB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
244_F 199_L 1.17 0.00
340_L 107_K 1.07 0.00
425_G 126_T 1.03 0.00
203_Y 113_V 1.02 0.00
391_C 86_P 0.97 0.00
334_F 147_K 0.96 0.00
151_T 72_K 0.93 0.00
61_G 220_G 0.93 0.00
402_N 166_E 0.92 0.00
198_R 220_G 0.91 0.00
128_D 43_G 0.91 0.00
278_P 64_E 0.88 0.00
168_E 314_A 0.88 0.00
284_Q 311_D 0.87 0.00
106_A 168_Q 0.87 0.00
407_I 240_P 0.87 0.00
318_A 204_H 0.86 0.00
362_F 287_P 0.86 0.00
437_Y 268_A 0.86 0.00
145_V 159_G 0.86 0.00
331_V 198_R 0.86 0.00
389_A 273_T 0.85 0.00
409_I 52_K 0.85 0.00
432_Q 183_T 0.85 0.00
208_D 268_A 0.85 0.00
378_I 195_E 0.84 0.00
229_A 148_L 0.84 0.00
242_S 252_V 0.84 0.00
34_L 163_P 0.83 0.00
164_R 238_R 0.83 0.00
243_A 156_M 0.82 0.00
138_I 227_G 0.82 0.00
49_V 274_T 0.82 0.00
328_L 62_F 0.81 0.00
289_Q 129_I 0.80 0.00
406_S 62_F 0.80 0.00
152_V 111_P 0.80 0.00
215_A 285_S 0.80 0.00
284_Q 167_K 0.80 0.00
278_P 309_I 0.79 0.00
437_Y 274_T 0.79 0.00
189_T 210_R 0.79 0.00
65_V 149_D 0.78 0.00
268_I 108_L 0.78 0.00
331_V 196_A 0.78 0.00
409_I 223_L 0.78 0.00
244_F 45_V 0.78 0.00
191_E 249_G 0.77 0.00
210_Y 65_A 0.76 0.00
445_N 94_Q 0.76 0.00
378_I 53_G 0.76 0.00
335_P 195_E 0.76 0.00
325_V 240_P 0.76 0.00
397_L 200_S 0.75 0.00
270_T 288_I 0.75 0.00
168_E 21_D 0.75 0.00
196_K 121_P 0.75 0.00
347_Q 150_E 0.74 0.00
301_A 308_T 0.74 0.00
134_M 299_C 0.73 0.00
171_Q 23_D 0.73 0.00
91_D 142_G 0.73 0.00
282_D 148_L 0.73 0.00
177_D 23_D 0.73 0.00
110_F 157_P 0.73 0.00
300_R 214_F 0.73 0.00
143_L 254_Y 0.73 0.00
413_T 97_L 0.72 0.00
79_P 297_A 0.72 0.00
440_T 119_E 0.72 0.00
317_V 157_P 0.72 0.00
190_R 173_W 0.72 0.00
246_R 156_M 0.72 0.00
412_L 292_L 0.72 0.00
170_Q 152_Q 0.72 0.00
368_T 211_V 0.71 0.00
378_I 191_F 0.71 0.00
106_A 234_A 0.71 0.00
152_V 235_N 0.71 0.00
310_M 259_T 0.71 0.00
403_M 62_F 0.71 0.00
91_D 61_G 0.71 0.00
325_V 43_G 0.71 0.00
450_Q 191_F 0.71 0.00
318_A 298_C 0.71 0.00
420_F 137_P 0.71 0.00
154_L 85_I 0.70 0.00
271_R 35_G 0.70 0.00
191_E 60_L 0.70 0.00
232_Q 154_V 0.70 0.00
113_D 226_H 0.70 0.00
242_S 52_K 0.70 0.00
376_M 154_V 0.70 0.00
405_T 61_G 0.70 0.00
345_T 261_G 0.70 0.00
301_A 131_E 0.69 0.00
300_R 199_L 0.69 0.00
38_Y 47_I 0.69 0.00
336_A 94_Q 0.69 0.00
253_L 306_A 0.69 0.00
324_K 273_T 0.69 0.00
384_P 310_S 0.69 0.00
149_R 101_L 0.69 0.00
394_I 152_Q 0.69 0.00
234_N 297_A 0.69 0.00
53_P 275_A 0.69 0.00
391_C 175_M 0.68 0.00
335_P 35_G 0.68 0.00
331_V 203_S 0.68 0.00
57_L 101_L 0.68 0.00
450_Q 230_G 0.68 0.00
409_I 95_A 0.68 0.00
193_Y 104_L 0.68 0.00
367_I 93_K 0.68 0.00
195_E 285_S 0.68 0.00
193_Y 43_G 0.68 0.00
405_T 46_L 0.68 0.00
391_C 85_I 0.68 0.00
394_I 297_A 0.68 0.00
61_G 119_E 0.68 0.00
253_L 73_L 0.68 0.00
252_I 31_H 0.68 0.00
210_Y 124_V 0.68 0.00
204_L 127_E 0.67 0.00
222_Y 73_L 0.67 0.00
113_D 124_V 0.67 0.00
315_G 118_S 0.67 0.00
349_P 149_D 0.67 0.00
331_V 207_Y 0.67 0.00
145_V 119_E 0.67 0.00
91_D 36_E 0.67 0.00
252_I 156_M 0.67 0.00
353_H 221_R 0.67 0.00
259_R 62_F 0.67 0.00
252_I 270_D 0.67 0.00
447_I 300_L 0.67 0.00
209_C 153_P 0.67 0.00
444_V 227_G 0.67 0.00
48_I 188_A 0.67 0.00
226_E 70_T 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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