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OPENSEQ.org

LSPA - RS20
UniProt: P00804 - P0A7U7
Length: 251
Sequences: 199
Seq/Len: 0.83
I_Prob: 0.00

LSPA - Lipoprotein signal peptidase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LSPA
RS20 - 30S ribosomal protein S20
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS20
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
24_L 54_M 1.38 0.00
129_V 31_F 1.30 0.00
127_F 42_G 1.27 0.00
104_I 28_M 1.21 0.00
60_F 20_H 1.18 0.00
101_Y 55_Q 1.17 0.00
20_L 31_F 1.15 0.00
104_I 54_M 1.14 0.00
151_I 52_N 1.14 0.00
151_I 32_I 1.14 0.00
70_W 86_L 1.13 0.00
96_L 32_I 1.12 0.00
108_A 42_G 1.12 0.00
70_W 56_P 1.12 0.00
120_F 77_A 1.11 0.00
86_M 54_M 1.11 0.00
24_L 78_N 1.08 0.00
59_S 73_A 1.07 0.00
148_A 60_R 1.05 0.00
83_L 7_A 1.05 0.00
42_L 52_N 1.04 0.00
101_Y 51_F 1.04 0.00
40_V 55_Q 1.04 0.00
130_G 45_A 1.03 0.00
21_I 45_A 1.03 0.00
145_C 46_A 1.02 0.00
31_L 51_F 0.99 0.00
25_G 53_E 0.99 0.00
86_M 56_P 0.97 0.00
77_I 49_K 0.97 0.00
69_R 39_I 0.96 0.00
56_A 59_D 0.96 0.00
39_T 37_A 0.96 0.00
87_M 87_A 0.96 0.00
51_A 44_K 0.96 0.00
108_A 25_R 0.96 0.00
18_V 84_N 0.96 0.00
102_A 44_K 0.95 0.00
122_V 41_A 0.95 0.00
84_A 36_Y 0.95 0.00
59_S 25_R 0.94 0.00
71_F 48_Q 0.93 0.00
56_A 71_K 0.92 0.00
33_N 77_A 0.92 0.00
125_I 39_I 0.91 0.00
127_F 55_Q 0.91 0.00
56_A 73_A 0.91 0.00
22_I 4_I 0.91 0.00
109_L 47_A 0.90 0.00
149_A 53_E 0.90 0.00
34_F 13_Q 0.90 0.00
94_Q 13_Q 0.89 0.00
149_A 73_A 0.89 0.00
155_G 5_K 0.89 0.00
79_I 78_N 0.88 0.00
74_G 43_D 0.88 0.00
83_L 58_V 0.88 0.00
117_W 40_E 0.88 0.00
30_I 19_K 0.88 0.00
62_A 41_A 0.88 0.00
147_G 70_N 0.88 0.00
112_L 74_R 0.87 0.00
38_D 32_I 0.87 0.00
80_S 84_N 0.87 0.00
112_L 58_V 0.87 0.00
155_G 28_M 0.86 0.00
104_I 32_I 0.86 0.00
112_L 52_N 0.86 0.00
122_V 63_A 0.86 0.00
112_L 18_R 0.86 0.00
150_L 62_A 0.86 0.00
51_A 64_K 0.85 0.00
136_T 78_N 0.85 0.00
113_F 43_D 0.85 0.00
78_G 45_A 0.85 0.00
124_M 59_D 0.85 0.00
19_V 85_K 0.84 0.00
19_V 41_A 0.84 0.00
56_A 76_K 0.84 0.00
151_I 63_A 0.84 0.00
50_Y 60_R 0.84 0.00
38_D 86_L 0.84 0.00
56_A 29_R 0.83 0.00
14_W 50_A 0.83 0.00
52_R 14_S 0.83 0.00
78_G 40_E 0.83 0.00
50_Y 12_I 0.83 0.00
134_F 54_M 0.83 0.00
54_Y 24_R 0.83 0.00
154_E 61_Q 0.82 0.00
126_D 66_L 0.82 0.00
136_T 24_R 0.82 0.00
67_W 73_A 0.82 0.00
134_F 19_K 0.82 0.00
31_L 5_K 0.81 0.00
48_L 42_G 0.81 0.00
26_S 39_I 0.81 0.00
127_F 20_H 0.81 0.00
34_F 54_M 0.81 0.00
19_V 56_P 0.81 0.00
86_M 86_L 0.81 0.00
68_Q 11_A 0.81 0.00
68_Q 29_R 0.80 0.00
100_A 85_K 0.80 0.00
29_L 39_I 0.79 0.00
91_K 58_V 0.79 0.00
43_F 19_K 0.79 0.00
29_L 50_A 0.79 0.00
86_M 80_T 0.78 0.00
142_T 55_Q 0.78 0.00
100_A 51_F 0.78 0.00
76_A 65_G 0.78 0.00
157_L 78_N 0.78 0.00
22_I 32_I 0.78 0.00
105_I 24_R 0.78 0.00
50_Y 28_M 0.78 0.00
11_R 63_A 0.77 0.00
125_I 31_F 0.77 0.00
103_L 49_K 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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