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suckerin_squid_loop_flanked_sheet Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix, or select a position from the PSSM below to see what it is coupled with.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0001 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 2.6 -0.2 -0.2
0002 0.4 -0.2 -0.2 0.6 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 1.2 -0.2 -0.2
0003 -0.2 0.5 -0.2 -0.1 -0.2 -0.2 0.1 1.4 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0004 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 3.3 -0.2 -0.2
0005 -0.2 0.7 -0.2 0.9 -0.2 0.1 0.4 -0.1 -0.2 -0.2 -0.2 -0.2 0.2 -0.2 -0.2 -0.2 -0.2 -0.1 -0.2 -0.2
0006 -0.2 -0.2 -0.2 0.1 -0.2 -0.2 -0.2 0 -0.2 -0.2 -0.2 -0.2 0.9 0.4 -0.2 -0.2 -0.2 0.7 0.4 -0.2
0007 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.8 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 0.2 -0.1 0.4 -0.1 -0.1
0008 0.2 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 1.1 -0.1
0009 1 -0.2 -0.2 -0.2 0.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.5 0.5 0.8 -0.2 -0.2
0010 0.8 -0.2 0.1 0.1 0.4 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.5 0.4 -0.2 -0.2
0011 0.7 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 0.8 0.2 -0.1 -0.1
0012 0.9 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 -0.2 1.3 1.1 -0.2 -0.2 -0.2
0013 0.1 0.4 -0.2 0.1 0.8 -0.2 -0.2 0.7 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0014 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 0.4 -0.1 -0.1 -0.1 1.2 0.2 -0.1 -0.1 -0.1
0015 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 0.2 0.5 -0.1 0.7 0.2 -0.1 -0.1 -0.1 -0.1
0016 0.4 0.1 -0.1 -0.2 0.4 0.5 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 1 0.1 -0.2 -0.2
0017 -0.2 -0.2 0.4 0.1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 0.5 -0.2 0.5 1.2 -0.2 -0.2 -0.2
0018 -0.1 -0.1 -0.1 0.2 0.2 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1
0019 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 0.8 0.2 -0.1 0.2 -0.1 0.2 -0.1 -0.1
0020 0.6 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 -0.2 0.1 -0.2 0.1 -0.2 -0.2 0.3 -0.2 -0.2 0.1 0.7 -0.2
0021 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 0.6 0.8 -0.1
0022 0.1 -0.2 0.1 0.4 0.4 -0.2 0.9 0.4 -0.2 0.2 -0.2 -0.2 -0.2 0.1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0023 0.7 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 0.8 -0.1 -0.1
0024 -0.2 0.9 -0.2 0.5 -0.2 -0.2 0.3 1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0025 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 0.2 -0.1 1.4 -0.1 -0.1
0026 0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.6 -0.2 1.8 -0.2 -0.2
0027 0.1 -0.2 0.1 0.6 0.6 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0028 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 3.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
Select residue pair below:
i_j Score Prob
0005_0010 2.057 0.97
0021_0024 1.990 0.97
0007_0011 1.966 0.96
0010_0016 1.634 0.88
0005_0015 1.456 0.78
0015_0019 1.336 0.69
0013_0018 1.335 0.69
0014_0018 1.237 0.60
0014_0019 1.216 0.58
0007_0025 1.209 0.58
0011_0026 1.150 0.52
0008_0011 1.142 0.51
0006_0024 1.026 0.40
0002_0007 1.002 0.38
0015_0025 0.998 0.38
0015_0021 0.984 0.36
0018_0022 0.984 0.36
0020_0023 0.972 0.35
0009_0016 0.965 0.35
0009_0019 0.955 0.34
0023_0027 0.952 0.34
0013_0025 0.876 0.27
0016_0027 0.826 0.24
0012_0018 0.811 0.23
0020_0024 0.788 0.21
0010_0017 0.780 0.21
0006_0011 0.778 0.20
0003_0014 0.777 0.20
0014_0027 0.763 0.20
0003_0018 0.717 0.17
0002_0008 0.680 0.15
0005_0011 0.672 0.15
0006_0021 0.670 0.14
0018_0021 0.665 0.14
0010_0019 0.652 0.14
0015_0018 0.651 0.14
0005_0027 0.616 0.12
0023_0026 0.581 0.11
0024_0027 0.567 0.10
0002_0005 0.563 0.10
Local Interactions:
i_j Score Prob
0007_0008 2.978 1.00
0026_0027 2.930 1.00
0020_0022 2.365 0.99
0008_0009 2.119 0.98
0015_0017 1.990 0.97
0020_0021 1.899 0.95
0023_0024 1.646 0.88
0012_0013 1.619 0.87
0021_0022 1.617 0.87
0007_0009 1.487 0.80
0017_0019 1.281 0.64
0013_0014 1.120 0.49
0023_0025 1.077 0.45
0019_0021 1.058 0.43
0006_0008 1.054 0.43
0016_0017 1.012 0.39
0022_0023 0.782 0.21
0010_0011 0.739 0.18
0010_0012 0.698 0.16
0018_0020 0.688 0.15
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: G A Y G F ...
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