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PP align 20 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix, or select a position from the PSSM below to see what it is coupled with.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0001 0.1 -0.5 0.6 0.6 1 0 -0.6 -0.4 0 0 0.3 0.3 -0.6 0.1 0 0.3 0.4 -0.1 -0.6 -0.3
0002 0.1 1.6 0.7 0.6 0.2 -0.5 -0.9 0 -0.6 0.1 -0.1 -0.1 -0.4 0.2 -0.2 0.6 0.5 -0.5 0 -0.5
0003 0.8 -0.7 0.3 -0.5 -0.1 -0.3 -0.9 -0.4 0.1 0.5 0.5 -0.1 -0.4 0 0.6 0.3 0.6 1.8 -0.5 -0.9
0004 0.3 -0.5 -0.3 0 -0.1 -0.8 -0.8 -0.2 0.7 0.1 0.3 0.1 0.2 0.9 0.3 0.2 0.8 0.3 -0.1 -0.8
0005 0.1 -0.6 -0.3 -0.5 -0.2 -0.5 -1.2 0.3 1 0.3 0.1 -0.4 0.5 1.5 0.8 0.4 0.2 0.8 -0.5 -0.6
0006 -0.2 -0.2 0.4 0 0.1 -0.7 -0.9 -0.2 -0.2 -0.3 0.2 0 0.3 1.7 -0.1 0.6 0.4 0.9 -0.2 -0.5
0007 0.1 0 0.2 -0.7 -0.1 -0.5 -0.6 -0.2 -0.6 0 0.5 0.1 -0.5 0.7 0.4 1.9 1.4 -0.2 -0.1 -0.8
0008 0.3 -0.1 -0.6 -0.4 0.3 -0.6 -0.7 -0.4 0.3 -0.5 0.6 0.7 -0.2 0.2 0.2 0.6 0.3 2.5 -1 -0.7
0009 0.3 0.2 0.9 1.1 0.5 0.2 -0.4 -0.3 -0.2 -0.7 -0.1 0.1 -0.7 0 -0.1 0.2 0 0.3 -0.2 -0.2
0010 -0.2 -0.2 -0.3 0.3 0.1 -0.1 -0.6 -0.9 0 0.3 0.1 0.1 0.2 0.2 1.4 0.5 0.3 0.6 -0.1 -0.7
0011 0.7 0.2 0.5 0.7 0.7 -0.3 -0.5 0 0 -0.5 0.1 -0.1 -0.7 0.2 0 0.2 0.5 0 0 -1
0012 0.5 -0.3 -0.2 -0.2 0.1 -0.3 -0.8 -0.8 0.5 0.1 -0.5 0.2 -0.4 -0.1 0.7 0.6 0.3 1.8 0.5 -0.7
0013 0.5 0.6 0.8 0.7 0.7 0.1 -0.9 0 -0.7 -0.1 -0.3 0 -0.4 0.4 0.1 0.4 0.2 -0.2 -0.3 -0.5
0014 0.4 -0.7 0 -0.4 0 -0.1 -0.7 -0.2 0 -0.3 0 0.4 0.1 1.6 -0.2 1 0.7 0.4 0.1 -0.9
0015 0.2 0 -0.2 -0.1 -0.3 -0.7 -0.9 0.2 0.7 0.3 -0.2 0 0.3 0.7 0.1 0.9 0.3 0.7 -0.2 -0.7
0016 1 -0.6 0 0.2 -0.4 0 -0.5 -0.6 0 -0.3 -0.3 -0.3 -0.3 0.5 0 0.7 0.5 2.5 -0.2 -0.7
0017 0.5 -0.2 0.3 -0.1 0.4 -0.6 -0.8 -0.5 0.1 -0.1 0.5 0.1 -0.3 0.1 -0.1 1.1 1 0.2 -0.1 -0.6
0018 0.2 0.5 1.1 0.7 1.2 0 -1 -0.5 -0.3 0.2 -0.4 -0.1 -0.9 -0.1 0 0.4 0.8 0.4 -0.6 -0.6
0019 0.5 -0.2 -0.4 0.1 -0.3 -0.6 -1 -0.3 -0.3 0.1 -0.1 0.4 0.4 0.9 0.2 1.4 1 0.8 -0.8 -0.8
0020 0.4 0.2 0.1 -0.1 0.1 -0.2 0.2 -0.5 -0.4 0.2 0 0 0.2 0.6 0.3 0.1 0.3 0.8 -0.5 -0.9
Select residue pair below:
i_j Score Prob
0002_0013 1.833 1.00
0004_0012 1.698 1.00
0009_0019 1.559 1.00
0011_0018 1.427 1.00
0009_0016 1.375 0.99
0004_0007 1.355 0.99
0001_0010 1.258 0.99
0009_0020 1.253 0.99
0013_0017 1.247 0.99
0006_0019 1.097 0.96
0001_0006 1.056 0.95
0014_0020 0.965 0.90
0011_0014 0.901 0.86
0010_0017 0.880 0.84
0006_0015 0.860 0.82
0001_0004 0.841 0.80
0012_0015 0.830 0.79
0004_0020 0.817 0.77
0001_0014 0.751 0.69
0009_0015 0.711 0.62
0011_0020 0.705 0.61
0001_0008 0.692 0.59
0004_0010 0.686 0.58
0012_0016 0.668 0.55
0003_0006 0.642 0.51
0002_0017 0.633 0.49
0007_0011 0.631 0.49
0008_0017 0.628 0.48
Local Interactions:
i_j Score Prob
0018_0020 2.177 1.00
0001_0002 1.892 1.00
0017_0018 1.749 1.00
0005_0007 1.282 0.99
0019_0020 1.267 0.99
0002_0003 1.204 0.98
0001_0003 1.045 0.94
0010_0012 1.001 0.92
0007_0009 0.891 0.85
0015_0017 0.830 0.79
0011_0013 0.826 0.79
0003_0004 0.803 0.76
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: T F G D N ...
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