May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
BUB1_CDI 12-35 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix, or select a position from the PSSM below to see what it is coupled with.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0003 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.9 -0.1
0004 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.9 -0.1 -0.1 -0.1 -0.1
0005 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.5 -0.1
0006 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 3.3 -0.2 -0.2 -0.2
0007 0 -0.1 0.7 0.3 1.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1
0008 -0.1 0.2 -0.1 0 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 0.3 0.7 -0.1 -0.1 0.2 -0.1 -0.1 0.5
0009 -0.1 -0.1 -0.1 0.2 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.4 -0.1 -0.1 -0.1
0010 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.4 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0011 0.5 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 0.2 0.9 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0012 1.6 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0013 -0.1 -0.1 0.1 0.8 -0.1 1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0014 0.6 -0.2 -0.2 -0.2 -0.1 -0.2 -0.2 -0.2 1 -0.1 -0.1 -0.2 -0.1 0.3 -0.1 0.2 -0.2 0.5 -0.2 -0.2
0015 0.3 0.2 0.1 -0.2 0.3 -0.2 -0.2 -0.2 0.8 0.7 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.1 -0.2 -0.2 -0.2
0016 -0.1 -0.1 1.6 0 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0017 -0.1 -0.1 -0.1 -0.1 -0.1 0.9 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.9 -0.1 -0.1 0.2 -0.1 -0.1 -0.1
0018 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 0.2 0.2 -0.1 -0.1 0.3 0.1 0.1 -0.1 0.2 -0.1 -0.1
0019 -0.1 -0.1 0.2 0.7 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0020 -0.2 3.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0021 0.4 -0.2 -0.2 -0.1 0 0 -0.2 -0.2 -0.2 -0.2 -0.1 -0.1 -0.2 0.7 0.6 -0.1 -0.2 0.6 -0.2 -0.2
0022 0.4 -0.2 -0.1 -0.2 0.1 0.5 -0.2 -0.2 -0.2 0.4 0.2 -0.1 -0.2 -0.2 0.4 -0.2 0.2 -0.2 -0.2 -0.2
0023 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.5 -0.1
Select residue pair below:
i_j Score Prob
0007_0014 3.233 1.00
0003_0017 1.976 0.99
0004_0017 1.976 0.99
0013_0019 1.688 0.97
0019_0022 1.616 0.96
0007_0016 1.396 0.89
0011_0019 1.323 0.86
0005_0019 1.169 0.74
0008_0012 1.081 0.66
0016_0021 1.077 0.65
0013_0022 1.076 0.65
0018_0021 1.075 0.65
0008_0021 1.066 0.64
0008_0018 1.064 0.64
0007_0013 0.914 0.47
0011_0022 0.830 0.37
0010_0018 0.788 0.33
0009_0013 0.769 0.31
0015_0021 0.752 0.29
0011_0015 0.668 0.22
0009_0018 0.667 0.22
0007_0023 0.665 0.22
0013_0023 0.638 0.20
0008_0015 0.592 0.17
0003_0009 0.438 0.09
0004_0009 0.438 0.09
0014_0018 0.429 0.08
0019_0023 0.401 0.08
0013_0018 0.400 0.07
0003_0018 0.397 0.07
0004_0018 0.397 0.07
Local Interactions:
i_j Score Prob
0010_0012 2.696 1.00
0003_0004 2.625 1.00
0011_0012 1.905 0.99
0019_0021 1.530 0.94
0010_0011 1.306 0.85
0016_0017 1.279 0.83
0008_0009 1.212 0.78
0016_0018 1.113 0.69
0014_0015 1.020 0.59
0008_0010 0.900 0.45
0015_0017 0.599 0.17
0014_0016 0.452 0.09
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: V Q P S P ...
Page generated in 0.2861 seconds.