| 1086C |
| ID: | 1472854316 |
Query Sequence |
Download Alignment We filter this alignment to remove positions that have > 75% gaps before running GREMLIN. |
| Length: | 849 (849) | ||
| Sequences: | 6086 (374.1) | ||
| Seq/Len: | 7.168 | ||
| Nf(neff/√len): | 12.8 |
Jackhmmer Results: (2016_04)
Sequences per length for each position, BEFORE the coverage/gap filter was applied
Legend: Dots above the red line, indicates positions where there is > 5 sequences per length (if visible, green bar = 20 seq/len). Point of this graphic is to give you an idea if resubmitting a sub-portion of your sequence might help increase the overall Seq/Len (which after applying the coverage filter is at: 7.168).
Sequences per length for each position, AFTER the coverage/gap filter was applied
Residue pairs sorted by coevolution strength:
Legend: The darker and larger the blue dots, the higher strength in covariance. Below we provide the list of the top [1.5 x length] covarying residues with sequence seperation > 3. The i and j are positions as given in the input sequence.
| i | j | Scaled score | Prob |
| 272_T | 437_L | 5.195 | 1.00 |
| 618_D | 622_N | 3.877 | 1.00 |
| 488_K | 593_A | 3.715 | 1.00 |
| 318_H | 322_N | 3.460 | 1.00 |
| 336_E | 339_K | 3.233 | 1.00 |
| 644_K | 648_A | 3.220 | 1.00 |
| 818_R | 822_I | 3.084 | 1.00 |
| 92_K | 264_E | 2.954 | 1.00 |
| 347_K | 451_T | 2.843 | 1.00 |
| 553_Q | 615_M | 2.843 | 1.00 |
| 733_R | 744_D | 2.693 | 1.00 |
| 200_D | 366_R | 2.567 | 1.00 |
| 219_N | 229_R | 2.487 | 1.00 |
| 313_N | 403_K | 2.381 | 1.00 |
| 282_N | 325_K | 2.326 | 1.00 |
| 109_E | 191_T | 2.326 | 1.00 |
| 320_N | 324_S | 2.262 | 1.00 |
| 264_E | 267_T | 2.258 | 1.00 |
| 57_E | 60_V | 2.220 | 1.00 |
| 712_G | 722_E | 2.217 | 1.00 |
| 7_W | 18_I | 2.167 | 1.00 |
| 817_E | 822_I | 2.157 | 1.00 |
| 790_G | 793_V | 2.153 | 1.00 |
| 297_R | 302_Q | 2.148 | 1.00 |
| 616_Q | 619_R | 2.147 | 1.00 |
| 501_I | 505_F | 2.133 | 1.00 |
| 627_T | 630_R | 2.132 | 1.00 |
| 44_K | 94_D | 2.122 | 1.00 |
| 18_I | 22_W | 2.089 | 1.00 |
| 145_F | 160_A | 2.079 | 1.00 |
| 606_N | 610_G | 2.077 | 1.00 |
| 708_P | 712_G | 2.065 | 1.00 |
| 14_L | 18_I | 2.063 | 1.00 |
| 347_K | 453_T | 2.022 | 1.00 |
| 15_I | 21_F | 1.995 | 1.00 |
| 220_K | 256_E | 1.987 | 1.00 |
| 18_I | 21_F | 1.975 | 1.00 |
| 221_T | 257_E | 1.934 | 1.00 |
| 80_V | 218_N | 1.925 | 1.00 |
| 41_K | 622_N | 1.902 | 1.00 |
| 334_G | 382_Y | 1.886 | 1.00 |
| 258_E | 336_E | 1.866 | 1.00 |
| 153_D | 181_R | 1.862 | 1.00 |
| 645_D | 648_A | 1.834 | 1.00 |
| 266_L | 340_H | 1.822 | 1.00 |
| 212_F | 276_H | 1.807 | 1.00 |
| 12_Q | 15_I | 1.803 | 1.00 |
| 22_W | 26_M | 1.789 | 1.00 |
| 409_N | 416_R | 1.783 | 1.00 |
| 187_T | 191_T | 1.754 | 1.00 |
| 294_K | 306_A | 1.739 | 1.00 |
| 776_L | 780_Q | 1.739 | 1.00 |
| 741_L | 744_D | 1.737 | 1.00 |
| 504_V | 648_A | 1.719 | 1.00 |
| 42_E | 615_M | 1.713 | 1.00 |
| 446_N | 449_N | 1.713 | 1.00 |
| 615_M | 618_D | 1.705 | 1.00 |
| 15_I | 22_W | 1.701 | 1.00 |
| 289_N | 426_E | 1.700 | 1.00 |
| 686_A | 744_D | 1.689 | 1.00 |
| 184_N | 189_A | 1.682 | 1.00 |
| 259_I | 266_L | 1.681 | 1.00 |
| 4_R | 10_W | 1.672 | 1.00 |
| 87_N | 227_P | 1.669 | 1.00 |
| 14_L | 21_F | 1.668 | 1.00 |
| 810_T | 814_A | 1.667 | 1.00 |
| 826_V | 830_C | 1.666 | 1.00 |
| 60_V | 197_V | 1.651 | 1.00 |
| 164_K | 184_N | 1.643 | 1.00 |
| 297_R | 303_T | 1.636 | 1.00 |
| 776_L | 779_L | 1.635 | 1.00 |
| 711_R | 717_G | 1.630 | 1.00 |
| 709_N | 712_G | 1.622 | 1.00 |
| 778_G | 781_R | 1.614 | 1.00 |
| 150_E | 184_N | 1.610 | 1.00 |
| 742_V | 761_I | 1.608 | 1.00 |
| 264_E | 268_N | 1.606 | 1.00 |
| 808_I | 811_I | 1.602 | 1.00 |
| 842_Q | 845_E | 1.601 | 1.00 |
| 21_F | 26_M | 1.598 | 1.00 |
| 830_C | 834_R | 1.598 | 1.00 |
| 550_H | 553_Q | 1.594 | 1.00 |
| 806_S | 810_T | 1.589 | 1.00 |
| 841_R | 845_E | 1.588 | 1.00 |
| 777_K | 780_Q | 1.583 | 1.00 |
| 732_A | 744_D | 1.569 | 1.00 |
| 775_S | 778_G | 1.565 | 1.00 |
| 221_T | 229_R | 1.563 | 1.00 |
| 316_Q | 322_N | 1.561 | 1.00 |
| 845_E | 848_L | 1.560 | 1.00 |
| 726_Q | 789_L | 1.555 | 1.00 |
| 711_R | 729_D | 1.546 | 1.00 |
| 811_I | 817_E | 1.535 | 0.99 |
| 839_R | 845_E | 1.531 | 0.99 |
| 551_M | 632_L | 1.530 | 0.99 |
| 41_K | 618_D | 1.525 | 0.99 |
| 843_G | 848_L | 1.523 | 0.99 |
| 168_V | 181_R | 1.515 | 0.99 |
| 798_L | 802_K | 1.514 | 0.99 |
| 774_S | 779_L | 1.513 | 0.99 |
| 60_V | 63_V | 1.510 | 0.99 |
| 6_I | 18_I | 1.505 | 0.99 |
| 482_V | 632_L | 1.504 | 0.99 |
| 221_T | 225_T | 1.500 | 0.99 |
| 791_S | 794_Q | 1.499 | 0.99 |
| 774_S | 778_G | 1.498 | 0.99 |
| 777_K | 781_R | 1.497 | 0.99 |
| 282_N | 286_T | 1.487 | 0.99 |
| 684_I | 691_V | 1.485 | 0.99 |
| 818_R | 826_V | 1.485 | 0.99 |
| 10_W | 14_L | 1.484 | 0.99 |
| 841_R | 848_L | 1.480 | 0.99 |
| 839_R | 842_Q | 1.476 | 0.99 |
| 794_Q | 818_R | 1.471 | 0.99 |
| 707_T | 742_V | 1.471 | 0.99 |
| 150_E | 156_H | 1.465 | 0.99 |
| 711_R | 727_D | 1.464 | 0.99 |
| 785_I | 794_Q | 1.461 | 0.99 |
| 175_S | 178_G | 1.460 | 0.99 |
| 279_E | 332_K | 1.459 | 0.99 |
| 809_D | 817_E | 1.456 | 0.99 |
| 295_S | 309_D | 1.449 | 0.99 |
| 318_H | 324_S | 1.443 | 0.99 |
| 321_I | 350_P | 1.441 | 0.99 |
| 318_H | 399_T | 1.441 | 0.99 |
| 356_L | 416_R | 1.437 | 0.99 |
| 259_I | 329_T | 1.425 | 0.99 |
| 708_P | 722_E | 1.419 | 0.99 |
| 775_S | 779_L | 1.419 | 0.99 |
| 18_I | 23_I | 1.416 | 0.99 |
| 657_N | 669_K | 1.416 | 0.99 |
| 829_I | 832_A | 1.412 | 0.99 |
| 259_I | 276_H | 1.410 | 0.99 |
| 826_V | 829_I | 1.409 | 0.99 |
| 781_R | 794_Q | 1.404 | 0.99 |
| 781_R | 785_I | 1.401 | 0.99 |
| 691_V | 718_G | 1.400 | 0.99 |
| 366_R | 428_T | 1.393 | 0.99 |
| 21_F | 25_N | 1.391 | 0.99 |
| 416_R | 553_Q | 1.389 | 0.99 |
| 147_A | 158_V | 1.386 | 0.99 |
| 191_T | 409_N | 1.383 | 0.99 |
| 770_L | 793_V | 1.381 | 0.99 |
| 641_K | 644_K | 1.379 | 0.99 |
| 212_F | 476_E | 1.378 | 0.99 |
| 574_K | 632_L | 1.369 | 0.99 |
| 6_I | 10_W | 1.368 | 0.99 |
| 12_Q | 21_F | 1.363 | 0.99 |
| 268_N | 460_D | 1.360 | 0.98 |
| 744_D | 750_C | 1.359 | 0.98 |
| 844_F | 849_L | 1.348 | 0.98 |
| 41_K | 478_K | 1.347 | 0.98 |
| 259_I | 334_G | 1.344 | 0.98 |
| 41_K | 44_K | 1.344 | 0.98 |
| 279_E | 325_K | 1.344 | 0.98 |
| 783_W | 787_R | 1.329 | 0.98 |
| 356_L | 360_T | 1.329 | 0.98 |
| 842_Q | 848_L | 1.329 | 0.98 |
| 8_K | 12_Q | 1.328 | 0.98 |
| 637_N | 644_K | 1.321 | 0.98 |
| 6_I | 14_L | 1.315 | 0.98 |
| 284_V | 430_N | 1.309 | 0.98 |
| 713_P | 729_D | 1.308 | 0.98 |
| 710_P | 713_P | 1.306 | 0.98 |
| 220_K | 257_E | 1.304 | 0.98 |
| 303_T | 684_I | 1.303 | 0.98 |
| 341_F | 344_K | 1.302 | 0.98 |
| 109_E | 187_T | 1.298 | 0.98 |
| 338_A | 382_Y | 1.298 | 0.98 |
| 442_G | 452_E | 1.297 | 0.98 |
| 616_Q | 620_E | 1.296 | 0.98 |
| 278_N | 332_K | 1.292 | 0.98 |
| 756_L | 759_D | 1.290 | 0.98 |
| 189_A | 359_T | 1.288 | 0.98 |
| 321_I | 553_Q | 1.284 | 0.98 |
| 15_I | 25_N | 1.282 | 0.98 |
| 709_N | 742_V | 1.282 | 0.98 |
| 356_L | 408_I | 1.281 | 0.98 |
| 761_I | 793_V | 1.281 | 0.98 |
| 726_Q | 732_A | 1.280 | 0.98 |
| 6_I | 21_F | 1.278 | 0.97 |
| 686_A | 733_R | 1.277 | 0.97 |
| 569_I | 574_K | 1.274 | 0.97 |
| 774_S | 777_K | 1.273 | 0.97 |
| 767_T | 794_Q | 1.270 | 0.97 |
| 413_E | 416_R | 1.269 | 0.97 |
| 443_G | 452_E | 1.269 | 0.97 |
| 769_E | 772_G | 1.266 | 0.97 |
| 840_I | 848_L | 1.263 | 0.97 |
| 221_T | 258_E | 1.262 | 0.97 |
| 338_A | 380_G | 1.259 | 0.97 |
| 14_L | 23_I | 1.259 | 0.97 |
| 776_L | 781_R | 1.257 | 0.97 |
| 323_E | 396_G | 1.257 | 0.97 |
| 334_G | 380_G | 1.255 | 0.97 |
| 830_C | 833_I | 1.254 | 0.97 |
| 780_Q | 793_V | 1.247 | 0.97 |
| 322_N | 399_T | 1.246 | 0.97 |
| 768_V | 771_L | 1.244 | 0.97 |
| 336_E | 413_E | 1.239 | 0.97 |
| 709_N | 713_P | 1.238 | 0.97 |
| 316_Q | 320_N | 1.236 | 0.97 |
| 838_R | 841_R | 1.234 | 0.97 |
| 662_S | 669_K | 1.234 | 0.97 |
| 109_E | 158_V | 1.232 | 0.97 |
| 578_L | 588_L | 1.229 | 0.97 |
| 742_V | 793_V | 1.224 | 0.96 |
| 7_W | 23_I | 1.221 | 0.96 |
| 622_N | 627_T | 1.221 | 0.96 |
| 158_V | 189_A | 1.218 | 0.96 |
| 707_T | 718_G | 1.215 | 0.96 |
| 15_I | 26_M | 1.214 | 0.96 |
| 722_E | 811_I | 1.214 | 0.96 |
| 839_R | 848_L | 1.212 | 0.96 |
| 18_I | 717_G | 1.209 | 0.96 |
| 14_L | 17_S | 1.209 | 0.96 |
| 19_L | 24_G | 1.208 | 0.96 |
| 744_D | 748_S | 1.203 | 0.96 |
| 588_L | 640_E | 1.199 | 0.96 |
| 794_Q | 817_E | 1.198 | 0.96 |
| 775_S | 780_Q | 1.197 | 0.96 |
| 405_K | 408_I | 1.196 | 0.96 |
| 150_E | 189_A | 1.194 | 0.96 |
| 522_T | 531_L | 1.193 | 0.96 |
| 708_P | 817_E | 1.192 | 0.96 |
| 745_D | 754_Y | 1.192 | 0.96 |
| 840_I | 843_G | 1.191 | 0.96 |
| 742_V | 760_F | 1.188 | 0.96 |
| 9_N | 835_N | 1.187 | 0.96 |
| 127_T | 654_N | 1.185 | 0.96 |
| 13_W | 16_W | 1.183 | 0.96 |
| 756_L | 769_E | 1.178 | 0.95 |
| 279_E | 328_N | 1.177 | 0.95 |
| 268_N | 375_S | 1.175 | 0.95 |
| 19_L | 60_V | 1.171 | 0.95 |
| 739_L | 748_S | 1.167 | 0.95 |
| 277_L | 336_E | 1.167 | 0.95 |
| 4_R | 8_K | 1.166 | 0.95 |
| 298_I | 302_Q | 1.165 | 0.95 |
| 780_Q | 785_I | 1.165 | 0.95 |
| 755_H | 771_L | 1.164 | 0.95 |
| 811_I | 835_N | 1.163 | 0.95 |
| 321_I | 329_T | 1.162 | 0.95 |
| 504_V | 553_Q | 1.162 | 0.95 |
| 7_W | 11_P | 1.162 | 0.95 |
| 837_P | 841_R | 1.159 | 0.95 |
| 132_N | 137_S | 1.158 | 0.95 |
| 97_E | 653_K | 1.157 | 0.95 |
| 202_I | 205_H | 1.156 | 0.95 |
| 22_W | 25_N | 1.156 | 0.95 |
| 707_T | 722_E | 1.155 | 0.95 |
| 21_F | 27_E | 1.155 | 0.95 |
| 55_A | 60_V | 1.154 | 0.95 |
| 618_D | 621_I | 1.152 | 0.95 |
| 293_R | 309_D | 1.151 | 0.95 |
| 15_I | 798_L | 1.149 | 0.95 |
| 553_Q | 569_I | 1.148 | 0.94 |
| 653_K | 660_D | 1.145 | 0.94 |
| 718_G | 781_R | 1.144 | 0.94 |
| 713_P | 717_G | 1.144 | 0.94 |
| 258_E | 278_N | 1.142 | 0.94 |
| 424_E | 428_T | 1.142 | 0.94 |
| 322_N | 501_I | 1.142 | 0.94 |
| 14_L | 771_L | 1.141 | 0.94 |
| 282_N | 430_N | 1.140 | 0.94 |
| 12_Q | 22_W | 1.139 | 0.94 |
| 543_R | 553_Q | 1.136 | 0.94 |
| 476_E | 632_L | 1.134 | 0.94 |
| 272_T | 277_L | 1.129 | 0.94 |
| 10_W | 18_I | 1.128 | 0.94 |
| 80_V | 615_M | 1.128 | 0.94 |
| 630_R | 634_D | 1.127 | 0.94 |
| 839_R | 843_G | 1.124 | 0.94 |
| 837_P | 842_Q | 1.124 | 0.94 |
| 12_Q | 19_L | 1.123 | 0.94 |
| 212_F | 641_K | 1.122 | 0.94 |
| 457_G | 460_D | 1.120 | 0.93 |
| 736_S | 742_V | 1.118 | 0.93 |
| 18_I | 789_L | 1.117 | 0.93 |
| 814_A | 826_V | 1.114 | 0.93 |
| 795_Y | 799_E | 1.114 | 0.93 |
| 707_T | 736_S | 1.110 | 0.93 |
| 101_E | 160_A | 1.108 | 0.93 |
| 302_Q | 493_E | 1.106 | 0.93 |
| 173_N | 179_E | 1.106 | 0.93 |
| 605_Q | 616_Q | 1.104 | 0.93 |
| 13_W | 802_K | 1.103 | 0.93 |
| 4_R | 25_N | 1.100 | 0.93 |
| 148_T | 153_D | 1.099 | 0.93 |
| 10_W | 23_I | 1.097 | 0.93 |
| 771_L | 781_R | 1.095 | 0.92 |
| 645_D | 684_I | 1.095 | 0.92 |
| 308_G | 424_E | 1.095 | 0.92 |
| 8_K | 18_I | 1.095 | 0.92 |
| 731_S | 735_A | 1.093 | 0.92 |
| 569_I | 618_D | 1.093 | 0.92 |
| 798_L | 846_T | 1.090 | 0.92 |
| 770_L | 785_I | 1.089 | 0.92 |
| 846_T | 849_L | 1.089 | 0.92 |
| 709_N | 726_Q | 1.087 | 0.92 |
| 8_K | 24_G | 1.085 | 0.92 |
| 732_A | 736_S | 1.085 | 0.92 |
| 428_T | 478_K | 1.084 | 0.92 |
| 618_D | 627_T | 1.083 | 0.92 |
| 709_N | 717_G | 1.083 | 0.92 |
| 733_R | 740_T | 1.083 | 0.92 |
| 645_D | 651_S | 1.082 | 0.92 |
| 402_C | 411_W | 1.080 | 0.92 |
| 705_T | 718_G | 1.080 | 0.92 |
| 616_Q | 654_N | 1.079 | 0.92 |
| 409_N | 457_G | 1.079 | 0.92 |
| 827_Q | 830_C | 1.079 | 0.92 |
| 18_I | 709_N | 1.077 | 0.92 |
| 6_I | 11_P | 1.077 | 0.92 |
| 709_N | 761_I | 1.074 | 0.91 |
| 390_T | 395_N | 1.074 | 0.91 |
| 440_R | 452_E | 1.072 | 0.91 |
| 799_E | 807_L | 1.072 | 0.91 |
| 22_W | 27_E | 1.071 | 0.91 |
| 313_N | 322_N | 1.071 | 0.91 |
| 11_P | 23_I | 1.068 | 0.91 |
| 796_W | 804_A | 1.067 | 0.91 |
| 304_F | 309_D | 1.065 | 0.91 |
| 748_S | 798_L | 1.065 | 0.91 |
| 160_A | 618_D | 1.064 | 0.91 |
| 747_R | 751_L | 1.064 | 0.91 |
| 383_R | 386_T | 1.062 | 0.91 |
| 22_W | 708_P | 1.061 | 0.91 |
| 709_N | 767_T | 1.058 | 0.91 |
| 709_N | 722_E | 1.056 | 0.91 |
| 736_S | 748_S | 1.054 | 0.90 |
| 44_K | 767_T | 1.051 | 0.90 |
| 184_N | 416_R | 1.050 | 0.90 |
| 633_E | 640_E | 1.049 | 0.90 |
| 726_Q | 761_I | 1.047 | 0.90 |
| 844_F | 847_A | 1.046 | 0.90 |
| 13_W | 17_S | 1.045 | 0.90 |
| 553_Q | 618_D | 1.045 | 0.90 |
| 711_R | 718_G | 1.044 | 0.90 |
| 785_I | 817_E | 1.040 | 0.90 |
| 218_N | 221_T | 1.038 | 0.90 |
| 460_D | 662_S | 1.038 | 0.90 |
| 44_K | 618_D | 1.037 | 0.89 |
| 7_W | 12_Q | 1.036 | 0.89 |
| 297_R | 304_F | 1.034 | 0.89 |
| 12_Q | 25_N | 1.034 | 0.89 |
| 160_A | 413_E | 1.033 | 0.89 |
| 277_L | 437_L | 1.032 | 0.89 |
| 181_R | 410_M | 1.031 | 0.89 |
| 6_I | 9_N | 1.030 | 0.89 |
| 257_E | 278_N | 1.030 | 0.89 |
| 359_T | 493_E | 1.029 | 0.89 |
| 4_R | 11_P | 1.029 | 0.89 |
| 773_R | 781_R | 1.028 | 0.89 |
| 499_V | 588_L | 1.026 | 0.89 |
| 406_Q | 414_V | 1.025 | 0.89 |
| 685_F | 688_L | 1.025 | 0.89 |
| 219_N | 225_T | 1.024 | 0.89 |
| 158_V | 191_T | 1.024 | 0.89 |
| 2_R | 785_I | 1.023 | 0.89 |
| 746_L | 754_Y | 1.023 | 0.89 |
| 785_I | 818_R | 1.022 | 0.89 |
| 151_L | 618_D | 1.021 | 0.88 |
| 408_I | 710_P | 1.021 | 0.88 |
| 57_E | 109_E | 1.020 | 0.88 |
| 707_T | 712_G | 1.020 | 0.88 |
| 747_R | 755_H | 1.019 | 0.88 |
| 426_E | 430_N | 1.019 | 0.88 |
| 7_W | 22_W | 1.018 | 0.88 |
| 148_T | 162_F | 1.018 | 0.88 |
| 390_T | 393_S | 1.018 | 0.88 |
| 2_R | 607_E | 1.018 | 0.88 |
| 229_R | 343_S | 1.016 | 0.88 |
| 610_G | 684_I | 1.015 | 0.88 |
| 36_G | 40_W | 1.015 | 0.88 |
| 710_P | 722_E | 1.014 | 0.88 |
| 14_L | 722_E | 1.013 | 0.88 |
| 709_N | 817_E | 1.011 | 0.88 |
| 41_K | 57_E | 1.011 | 0.88 |
| 809_D | 818_R | 1.010 | 0.88 |
| 158_V | 187_T | 1.010 | 0.88 |
| 793_V | 798_L | 1.009 | 0.88 |
| 189_A | 424_E | 1.008 | 0.88 |
| 342_P | 345_T | 1.007 | 0.88 |
| 755_H | 772_G | 1.006 | 0.87 |
| 756_L | 771_L | 1.005 | 0.87 |
| 7_W | 21_F | 1.004 | 0.87 |
| 152_K | 159_H | 1.004 | 0.87 |
| 836_I | 840_I | 1.003 | 0.87 |
| 160_A | 553_Q | 1.003 | 0.87 |
| 164_K | 183_I | 1.003 | 0.87 |
| 384_N | 389_H | 1.002 | 0.87 |
| 707_T | 761_I | 1.001 | 0.87 |
| 338_A | 343_S | 1.001 | 0.87 |
| 804_A | 807_L | 1.001 | 0.87 |
| 676_G | 679_I | 1.000 | 0.87 |
| 411_W | 419_Y | 1.000 | 0.87 |
Prob = P(contact | scaled_score, seq/len).
Scaled Score = (raw_score/average(raw_scores)).
- Text file of contact predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
- See coupling matrix (for protein design or mutagenesis)
- Import to GREMLIN BETA - features includes ability to upload PDB and latest P(contact) calculation based on eLife 2015 fitting to PDB data.
GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled Score > 1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-position alignment confidence. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | M | Cov | P(%) | HHΔ | |
| 4tvpG | 1 | 0.5312 | 100 | 0.435 | Contact Map |
| 4r4hA | 1 | 0.3969 | 100 | 0.488 | Contact Map |
| 4jzzA | 1 | 0.3946 | 100 | 0.563 | Contact Map |
| 3lqaG | 1 | 0.3404 | 100 | 0.63 | Contact Map |
| 2bf1A | 1 | 0.3463 | 100 | 0.64 | Contact Map |
| 4i3sG | 1 | 0.2108 | 100 | 0.82 | Contact Map |
| 4tvpB | 1 | 0.1484 | 100 | 0.822 | Contact Map |
| 3tygA | 1 | 0.1826 | 100 | 0.843 | Contact Map |
| 1qbzA | 3 | 0.1413 | 100 | 0.859 | Contact Map |
| 4jpkA | 1 | 0.1885 | 100 | 0.872 | Contact Map |
Cov = coverage of hit
P(%) = probability
Sequence Conservation (Image Generated using WebLogo v3)