| UniProt: | Q47149 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13154 | ||
| Length: | 92 (88) | ||
| Sequences: | 569 | ||
| Seq/Len: | 6.47 |
| YAFQ
Paralog alert: 0.18 [within 20: 0.02] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 61_D | 69_I | 4.018 | 1.00 | |
| 49_D | 60_R | 3.999 | 1.00 | |
| 15_D | 83_R | 3.858 | 1.00 | |
| 28_K | 65_E | 3.25 | 1.00 | |
| 49_D | 72_Y | 2.583 | 1.00 | |
| 68_W | 84_T | 2.285 | 1.00 | |
| 35_L | 44_P | 2.134 | 1.00 | |
| 62_A | 70_L | 1.998 | 1.00 | |
| 4_R | 40_T | 1.995 | 1.00 | |
| 59_Y | 73_K | 1.831 | 1.00 | |
| 51_P | 60_R | 1.783 | 1.00 | |
| 40_T | 74_L | 1.72 | 1.00 | |
| 33_M | 81_F | 1.665 | 1.00 | |
| 22_R | 89_A | 1.641 | 1.00 | |
| 32_L | 62_A | 1.629 | 1.00 | |
| 84_T | 89_A | 1.534 | 0.99 | |
| 8_Y | 13_S | 1.518 | 0.99 | |
| 6_I | 38_N | 1.506 | 0.99 | |
| 61_D | 91_F | 1.453 | 0.99 | |
| 60_R | 72_Y | 1.43 | 0.99 | |
| 43_L | 49_D | 1.287 | 0.97 | |
| 6_I | 81_F | 1.271 | 0.97 | |
| 59_Y | 82_E | 1.188 | 0.95 | |
| 83_R | 90_L | 1.129 | 0.93 | |
| 73_K | 80_R | 1.127 | 0.93 | |
| 37_I | 44_P | 1.113 | 0.92 | |
| 33_M | 38_N | 1.099 | 0.91 | |
| 56_W | 59_Y | 1.087 | 0.91 | |
| 32_L | 47_Y | 1.08 | 0.90 | |
| 69_I | 91_F | 1.076 | 0.90 | |
| 12_Y | 29_L | 1.074 | 0.90 | |
| 35_L | 41_L | 1.068 | 0.90 | |
| 29_L | 68_W | 1.056 | 0.89 | |
| 49_D | 74_L | 1.043 | 0.88 | |
| 44_P | 47_Y | 1.026 | 0.87 | |
| 10_G | 17_K | 1.018 | 0.86 | |
| 24_K | 65_E | 1.013 | 0.86 | |
| 75_T | 78_L | 1.009 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2otrA | 1 | 0.9674 | 99.8 | 0.397 | Contact Map | 0.54 |
| 1z8mA | 1 | 0.9565 | 99.7 | 0.419 | Contact Map | 0.561 |
| 3oeiC | 8 | 0.9348 | 99.7 | 0.452 | Contact Map | 0.815 |
| 3g5oB | 2 | 0.913 | 99.4 | 0.547 | Contact Map | 0.602 |
| 2a6sA | 4 | 0.9022 | 99.4 | 0.556 | Contact Map | 0.779 |
| 1wmiA | 2 | 0.9348 | 99.2 | 0.583 | Contact Map | 0.741 |
| 3bpqB | 2 | 0.9022 | 99.2 | 0.592 | Contact Map | 0.656 |
| 4fxiA | 3 | 0.9022 | 99.1 | 0.6 | Contact Map | 0.596 |
| 2kheA | 1 | 0.913 | 99.1 | 0.602 | Contact Map | 0.545 |
| 3kxeA | 2 | 0.913 | 94.8 | 0.811 | Contact Map | 0.723 |
Sequence Conservation (Image Generated using WebLogo v3)