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OPENSEQ.org

AIS - Lipopolysaccharide core heptose(II)-phosphate phosphatase
UniProt: P45565 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG13155
Length: 200 (184)
Sequences: 68
Seq/Len: 0.37

AIS
Paralog alert: 0.13 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:
  • No predictions exist for P45565
  • Not enough sequences to perform GREMLIN analysis on (0.37 < 1)
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
2a6pA20.73599.50.815Contact Map
1qhfA20.73599.30.831Contact Map
1ujcA10.7199.30.832Contact Map
4hbzA10.7799.30.834Contact Map
4ij5A20.7399.30.834Contact Map
1h2eA10.73599.30.835Contact Map
1fztA10.76599.30.836Contact Map
1e58A10.74599.30.837Contact Map
4gpzA20.7599.20.838Contact Map
2rflA80.7599.20.839Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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