| UniProt: | P45465 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12779 | ||
| Length: | 131 (115) | ||
| Sequences: | 1530 | ||
| Seq/Len: | 13.30 |
| YRAN
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 66_R | 79_S | 4.02 | 1.00 | |
| 23_W | 67_Y | 3.268 | 1.00 | |
| 80_V | 112_V | 3.17 | 1.00 | |
| 38_F | 54_M | 3.035 | 1.00 | |
| 62_F | 92_A | 2.465 | 1.00 | |
| 25_A | 41_A | 2.428 | 1.00 | |
| 28_R | 38_F | 2.393 | 1.00 | |
| 28_R | 41_A | 2.372 | 1.00 | |
| 92_A | 110_F | 2.158 | 1.00 | |
| 56_E | 124_K | 2.129 | 1.00 | |
| 61_I | 109_R | 2.083 | 1.00 | |
| 19_T | 67_Y | 2.059 | 1.00 | |
| 28_R | 52_L | 2.001 | 1.00 | |
| 110_F | 127_F | 1.932 | 1.00 | |
| 77_A | 114_A | 1.875 | 1.00 | |
| 76_A | 114_A | 1.835 | 1.00 | |
| 75_G | 78_A | 1.723 | 1.00 | |
| 68_R | 79_S | 1.71 | 1.00 | |
| 27_A | 113_V | 1.703 | 1.00 | |
| 36_L | 122_W | 1.677 | 1.00 | |
| 112_V | 126_A | 1.672 | 1.00 | |
| 113_V | 122_W | 1.641 | 1.00 | |
| 54_M | 63_V | 1.578 | 1.00 | |
| 85_Q | 126_A | 1.52 | 1.00 | |
| 50_I | 53_I | 1.467 | 1.00 | |
| 43_V | 94_L | 1.442 | 1.00 | |
| 28_R | 32_E | 1.379 | 0.99 | |
| 17_K | 21_D | 1.377 | 0.99 | |
| 36_L | 54_M | 1.364 | 0.99 | |
| 42_N | 49_E | 1.362 | 0.99 | |
| 125_D | 128_N | 1.337 | 0.99 | |
| 61_I | 122_W | 1.306 | 0.99 | |
| 48_G | 87_K | 1.289 | 0.99 | |
| 123_I | 126_A | 1.269 | 0.99 | |
| 55_R | 58_R | 1.257 | 0.99 | |
| 56_E | 61_I | 1.256 | 0.99 | |
| 30_W | 34_K | 1.249 | 0.99 | |
| 40_A | 99_H | 1.242 | 0.98 | |
| 28_R | 54_M | 1.213 | 0.98 | |
| 80_V | 114_A | 1.21 | 0.98 | |
| 62_F | 108_C | 1.196 | 0.98 | |
| 81_T | 84_K | 1.181 | 0.98 | |
| 40_A | 95_W | 1.179 | 0.98 | |
| 80_V | 84_K | 1.168 | 0.97 | |
| 76_A | 116_T | 1.161 | 0.97 | |
| 110_F | 126_A | 1.159 | 0.97 | |
| 45_E | 91_T | 1.155 | 0.97 | |
| 34_K | 124_K | 1.147 | 0.97 | |
| 38_F | 41_A | 1.146 | 0.97 | |
| 23_W | 115_F | 1.126 | 0.97 | |
| 96_L | 108_C | 1.114 | 0.96 | |
| 30_W | 120_V | 1.092 | 0.96 | |
| 85_Q | 127_F | 1.091 | 0.96 | |
| 29_R | 32_E | 1.091 | 0.96 | |
| 88_L | 127_F | 1.074 | 0.95 | |
| 43_V | 95_W | 1.059 | 0.95 | |
| 26_Q | 115_F | 1.059 | 0.95 | |
| 77_A | 123_I | 1.058 | 0.95 | |
| 70_S | 74_G | 1.044 | 0.94 | |
| 34_K | 122_W | 1.036 | 0.94 | |
| 60_T | 95_W | 1.015 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3fovA | 1 | 0.9695 | 100 | 0.155 | Contact Map | 0.61 |
| 1gefA | 4 | 0.8015 | 99.9 | 0.413 | Contact Map | 0.35 |
| 1hh1A | 1 | 0.8321 | 99.9 | 0.421 | Contact Map | 0.326 |
| 2eo0A | 2 | 0.8473 | 99.9 | 0.437 | Contact Map | 0.525 |
| 1ob8A | 2 | 0.855 | 99.9 | 0.446 | Contact Map | 0.427 |
| 2wcwA | 4 | 0.8473 | 99.9 | 0.496 | Contact Map | 0.459 |
| 2ostA | 4 | 0.7863 | 99.5 | 0.651 | Contact Map | 0.434 |
| 1y88A | 1 | 0.9695 | 99 | 0.726 | Contact Map | 0.421 |
| 3dnxA | 1 | 0.8626 | 83.3 | 0.892 | Contact Map | 0.522 |
| 2vldA | 2 | 0.9008 | 78.9 | 0.897 | Contact Map | 0.569 |
Sequence Conservation (Image Generated using WebLogo v3)