- Protein RhsB
UniProt: |
P16917 |
Sequence
|
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
EcoGene: |
EG10847 |
Length: |
1411 (1342) |
Sequences: |
66 |
Seq/Len: |
0.05 |
RHSB
Paralog alert: 0.67 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes:
RHSA RHSB RHSC RHSD
|
|
GREMLIN Results:
- No predictions exist for P16917
- Not enough sequences to perform GREMLIN analysis on (0.05 < 1)
| HHsearch Results:
GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles
underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB |
Chains |
Cov |
P(%) |
HHΔ |
|
Acc |
|
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width. |