| UniProt: | P0AFC3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12082 | ||
| Length: | 147 (119) | ||
| Sequences: | 1062 | ||
| Seq/Len: | 8.92 |
| NUOA
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 102_E | 117_L | 3.517 | 1.00 | |
| 26_L | 30_M | 2.436 | 1.00 | |
| 88_W | 103_A | 2.185 | 1.00 | |
| 98_V | 102_E | 2.066 | 1.00 | |
| 111_L | 117_L | 1.975 | 1.00 | |
| 82_A | 117_L | 1.887 | 1.00 | |
| 46_K | 113_G | 1.806 | 1.00 | |
| 82_A | 111_L | 1.761 | 1.00 | |
| 95_S | 99_G | 1.715 | 1.00 | |
| 101_V | 105_I | 1.67 | 1.00 | |
| 109_V | 117_L | 1.647 | 1.00 | |
| 91_S | 94_E | 1.615 | 1.00 | |
| 25_G | 29_L | 1.605 | 1.00 | |
| 71_V | 117_L | 1.581 | 1.00 | |
| 104_A | 115_V | 1.543 | 1.00 | |
| 85_L | 103_A | 1.502 | 1.00 | |
| 28_C | 32_V | 1.493 | 1.00 | |
| 68_F | 71_V | 1.485 | 1.00 | |
| 100_F | 104_A | 1.483 | 1.00 | |
| 21_I | 25_G | 1.439 | 0.99 | |
| 70_L | 73_M | 1.384 | 0.99 | |
| 23_A | 34_G | 1.372 | 0.99 | |
| 63_R | 73_M | 1.346 | 0.99 | |
| 97_W | 101_V | 1.327 | 0.99 | |
| 39_G | 68_F | 1.318 | 0.99 | |
| 101_V | 104_A | 1.299 | 0.99 | |
| 48_V | 55_D | 1.298 | 0.99 | |
| 81_E | 110_L | 1.27 | 0.98 | |
| 29_L | 33_G | 1.236 | 0.98 | |
| 82_A | 114_L | 1.214 | 0.98 | |
| 106_F | 110_L | 1.205 | 0.97 | |
| 32_V | 36_F | 1.182 | 0.97 | |
| 18_I | 77_I | 1.175 | 0.97 | |
| 113_G | 123_L | 1.164 | 0.97 | |
| 78_F | 123_L | 1.14 | 0.96 | |
| 33_G | 108_F | 1.136 | 0.96 | |
| 48_V | 56_S | 1.12 | 0.96 | |
| 110_L | 114_L | 1.12 | 0.96 | |
| 14_W | 17_A | 1.107 | 0.95 | |
| 115_V | 118_V | 1.096 | 0.95 | |
| 25_G | 93_R | 1.087 | 0.95 | |
| 45_S | 48_V | 1.076 | 0.94 | |
| 37_L | 107_I | 1.075 | 0.94 | |
| 113_G | 120_I | 1.071 | 0.94 | |
| 96_G | 123_L | 1.068 | 0.94 | |
| 34_G | 38_G | 1.066 | 0.94 | |
| 63_R | 97_W | 1.061 | 0.94 | |
| 35_W | 40_R | 1.051 | 0.93 | |
| 52_S | 71_V | 1.041 | 0.93 | |
| 25_G | 36_F | 1.025 | 0.92 | |
| 30_M | 33_G | 1.02 | 0.92 | |
| 40_R | 47_N | 1.017 | 0.92 | |
| 107_I | 117_L | 1.01 | 0.91 | |
| 56_S | 66_A | 1.005 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3rkoA | 2 | 1 | 100 | 0.221 | Contact Map | 0.272 |
| 4he8A | 2 | 0.8095 | 100 | 0.31 | Contact Map | 0.289 |
| 3mk7C | 4 | 0.6871 | 6.5 | 0.954 | Contact Map | 0.277 |
| 3aqpA | 2 | 0.8367 | 4.8 | 0.957 | Contact Map | 0.23 |
| 2cavA | 1 | 0.3333 | 2.7 | 0.962 | Contact Map | |
| 2xq2A | 1 | 0.8571 | 2.6 | 0.962 | Contact Map | 0.246 |
| 4bw5A | 4 | 0.9592 | 2.2 | 0.964 | Contact Map | 0.291 |
| 2kv5A | 1 | 0.2245 | 2.2 | 0.964 | Contact Map | 0.368 |
| 4djkA | 2 | 0.9252 | 2.2 | 0.964 | Contact Map | 0.253 |
| 2nrgA | 1 | 0.4014 | 2.1 | 0.964 | Contact Map | 0.514 |
Sequence Conservation (Image Generated using WebLogo v3)