| UniProt: | P0A7Y0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10857 | ||
| Length: | 226 (219) | ||
| Sequences: | 2249 | ||
| Seq/Len: | 10.27 |
| RNC
Paralog alert: 0.05 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 54_N | 133_E | 3.697 | 1.00 | |
| 15_Y | 127_S | 2.829 | 1.00 | |
| 101_L | 106_F | 2.785 | 1.00 | |
| 10_Q | 20_Q | 2.689 | 1.00 | |
| 86_R | 109_E | 2.68 | 1.00 | |
| 54_N | 58_H | 2.58 | 1.00 | |
| 89_E | 92_E | 2.497 | 1.00 | |
| 37_N | 115_T | 2.46 | 1.00 | |
| 17_F | 23_L | 2.434 | 1.00 | |
| 46_S | 49_S | 2.386 | 1.00 | |
| 51_V | 136_I | 2.319 | 1.00 | |
| 47_I | 50_Y | 2.306 | 1.00 | |
| 177_V | 191_H | 2.172 | 1.00 | |
| 214_A | 217_E | 2.168 | 1.00 | |
| 176_V | 190_I | 2.073 | 1.00 | |
| 49_S | 53_A | 2.041 | 1.00 | |
| 175_L | 193_Q | 2.026 | 1.00 | |
| 181_G | 184_H | 2.02 | 1.00 | |
| 175_L | 191_H | 1.986 | 1.00 | |
| 86_R | 107_R | 1.963 | 1.00 | |
| 155_D | 158_T | 1.959 | 1.00 | |
| 190_I | 211_A | 1.933 | 1.00 | |
| 30_R | 38_E | 1.917 | 1.00 | |
| 131_T | 134_K | 1.878 | 1.00 | |
| 123_V | 135_L | 1.845 | 1.00 | |
| 84_L | 116_V | 1.828 | 1.00 | |
| 130_Q | 133_E | 1.815 | 1.00 | |
| 10_Q | 17_F | 1.785 | 1.00 | |
| 191_H | 199_E | 1.783 | 1.00 | |
| 85_A | 112_L | 1.775 | 1.00 | |
| 187_E | 204_T | 1.765 | 1.00 | |
| 134_K | 138_N | 1.757 | 1.00 | |
| 201_V | 218_Q | 1.737 | 1.00 | |
| 179_V | 186_Q | 1.713 | 1.00 | |
| 87_E | 143_R | 1.658 | 1.00 | |
| 53_A | 72_R | 1.65 | 1.00 | |
| 94_L | 115_T | 1.65 | 1.00 | |
| 90_L | 119_L | 1.647 | 1.00 | |
| 183_A | 186_Q | 1.634 | 1.00 | |
| 217_E | 221_K | 1.627 | 1.00 | |
| 194_V | 200_P | 1.578 | 1.00 | |
| 55_A | 59_R | 1.551 | 1.00 | |
| 27_L | 90_L | 1.548 | 1.00 | |
| 78_G | 113_A | 1.543 | 1.00 | |
| 59_R | 145_D | 1.54 | 1.00 | |
| 17_F | 126_D | 1.523 | 1.00 | |
| 189_T | 202_V | 1.493 | 1.00 | |
| 120_I | 135_L | 1.489 | 1.00 | |
| 178_Q | 189_T | 1.483 | 1.00 | |
| 116_V | 120_I | 1.441 | 1.00 | |
| 157_K | 212_E | 1.436 | 1.00 | |
| 32_A | 95_R | 1.427 | 1.00 | |
| 191_H | 202_V | 1.424 | 1.00 | |
| 46_S | 72_R | 1.408 | 1.00 | |
| 83_E | 143_R | 1.4 | 0.99 | |
| 161_Q | 174_Y | 1.375 | 0.99 | |
| 128_D | 131_T | 1.365 | 0.99 | |
| 205_G | 214_A | 1.351 | 0.99 | |
| 193_Q | 199_E | 1.347 | 0.99 | |
| 210_K | 214_A | 1.335 | 0.99 | |
| 100_E | 105_G | 1.326 | 0.99 | |
| 137_L | 141_Q | 1.318 | 0.99 | |
| 156_P | 213_Q | 1.316 | 0.99 | |
| 12_K | 89_E | 1.303 | 0.99 | |
| 201_V | 219_A | 1.298 | 0.99 | |
| 135_L | 139_W | 1.296 | 0.99 | |
| 189_T | 204_T | 1.295 | 0.99 | |
| 10_Q | 15_Y | 1.292 | 0.99 | |
| 63_V | 67_D | 1.29 | 0.99 | |
| 85_A | 116_V | 1.283 | 0.99 | |
| 115_T | 118_A | 1.267 | 0.99 | |
| 156_P | 217_E | 1.248 | 0.99 | |
| 10_Q | 16_T | 1.244 | 0.98 | |
| 192_C | 201_V | 1.243 | 0.98 | |
| 180_R | 187_E | 1.234 | 0.98 | |
| 77_R | 80_T | 1.231 | 0.98 | |
| 27_L | 115_T | 1.23 | 0.98 | |
| 30_R | 37_N | 1.226 | 0.98 | |
| 132_V | 136_I | 1.226 | 0.98 | |
| 203_G | 215_A | 1.215 | 0.98 | |
| 41_E | 45_D | 1.209 | 0.98 | |
| 9_L | 93_C | 1.205 | 0.98 | |
| 24_Q | 95_R | 1.204 | 0.98 | |
| 86_R | 112_L | 1.201 | 0.98 | |
| 127_S | 131_T | 1.191 | 0.98 | |
| 55_A | 137_L | 1.167 | 0.97 | |
| 185_D | 206_S | 1.163 | 0.97 | |
| 133_E | 137_L | 1.161 | 0.97 | |
| 180_R | 189_T | 1.151 | 0.97 | |
| 82_A | 86_R | 1.145 | 0.97 | |
| 39_R | 43_L | 1.131 | 0.97 | |
| 91_G | 112_L | 1.131 | 0.97 | |
| 206_S | 210_K | 1.126 | 0.97 | |
| 12_K | 93_C | 1.118 | 0.96 | |
| 160_L | 192_C | 1.118 | 0.96 | |
| 15_Y | 18_N | 1.118 | 0.96 | |
| 121_G | 124_F | 1.105 | 0.96 | |
| 157_K | 174_Y | 1.098 | 0.96 | |
| 218_Q | 222_K | 1.092 | 0.96 | |
| 27_L | 119_L | 1.084 | 0.96 | |
| 100_E | 108_R | 1.075 | 0.95 | |
| 9_L | 13_L | 1.067 | 0.95 | |
| 86_R | 91_G | 1.066 | 0.95 | |
| 51_V | 129_I | 1.063 | 0.95 | |
| 45_D | 117_E | 1.06 | 0.95 | |
| 69_S | 72_R | 1.056 | 0.95 | |
| 41_E | 117_E | 1.054 | 0.95 | |
| 48_L | 120_I | 1.052 | 0.95 | |
| 39_R | 57_Y | 1.047 | 0.94 | |
| 46_S | 50_Y | 1.044 | 0.94 | |
| 131_T | 135_L | 1.041 | 0.94 | |
| 105_G | 108_R | 1.041 | 0.94 | |
| 47_I | 121_G | 1.035 | 0.94 | |
| 58_H | 137_L | 1.034 | 0.94 | |
| 200_P | 219_A | 1.033 | 0.94 | |
| 20_Q | 24_Q | 1.03 | 0.94 | |
| 110_S | 114_D | 1.025 | 0.93 | |
| 37_N | 118_A | 1.024 | 0.93 | |
| 17_F | 127_S | 1.006 | 0.93 | |
| 63_V | 71_M | 1.005 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1o0wA | 2 | 0.9956 | 100 | 0.162 | Contact Map | 0.821 |
| 3n3wA | 2 | 0.9867 | 100 | 0.167 | Contact Map | 0.77 |
| 2a11A | 1 | 0.9823 | 100 | 0.185 | Contact Map | 0.694 |
| 2nugA | 2 | 0.9558 | 100 | 0.186 | Contact Map | 0.731 |
| 3rv0A | 4 | 0.9735 | 100 | 0.23 | Contact Map | 0.733 |
| 3c4bA | 1 | 0.9513 | 100 | 0.242 | Contact Map | 0.661 |
| 3o2rA | 2 | 0.6416 | 100 | 0.428 | Contact Map | 0.76 |
| 2qvwA | 4 | 0.6372 | 100 | 0.44 | Contact Map | 0.459 |
| 3rv1A | 2 | 0.6637 | 100 | 0.467 | Contact Map | 0.668 |
| 1u61A | 1 | 0.5354 | 100 | 0.596 | Contact Map | 0.574 |
Sequence Conservation (Image Generated using WebLogo v3)