May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

KCY - RARA
UniProt:
Length: 674
Sequences: 1467
Seq/Len: 2.27
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
22_C 36_A 1.09 0.01
172_E 29_I 0.87 0.01
36_S 434_L 0.86 0.00
104_A 410_I 0.80 0.00
197_A 194_D 0.80 0.00
137_V 81_I 0.71 0.00
138_F 277_W 0.71 0.00
210_E 404_V 0.69 0.00
156_H 135_I 0.69 0.00
118_R 396_A 0.68 0.00
25_M 284_A 0.67 0.00
104_A 125_A 0.67 0.00
25_M 112_V 0.66 0.00
153_E 384_G 0.65 0.00
146_F 166_S 0.65 0.00
15_G 143_E 0.65 0.00
106_F 61_T 0.64 0.00
202_L 349_V 0.64 0.00
174_L 35_L 0.64 0.00
42_V 278_Y 0.64 0.00
53_D 250_N 0.63 0.00
43_L 138_I 0.63 0.00
177_E 196_T 0.62 0.00
16_A 91_I 0.62 0.00
147_L 272_D 0.61 0.00
104_A 174_L 0.61 0.00
115_R 163_K 0.61 0.00
204_S 320_C 0.61 0.00
22_C 433_W 0.61 0.00
66_H 194_D 0.60 0.00
211_Q 351_T 0.60 0.00
20_T 288_P 0.60 0.00
212_V 338_V 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.5291 seconds.