May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

IF1 - LFTR
UniProt:
Length: 306
Sequences: 798
Seq/Len: 2.66
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_K 126_L 0.93 0.00
13_V 181_G 0.93 0.00
57_L 187_C 0.90 0.00
14_L 207_Y 0.87 0.00
25_E 154_C 0.86 0.00
61_D 135_W 0.85 0.00
65_G 65_A 0.85 0.00
65_G 16_P 0.84 0.00
5_D 120_Y 0.84 0.00
39_K 169_A 0.81 0.00
8_E 61_P 0.79 0.00
36_I 59_W 0.78 0.00
42_K 160_S 0.77 0.00
42_K 23_P 0.76 0.00
50_G 110_T 0.74 0.00
13_V 83_K 0.74 0.00
39_K 92_N 0.74 0.00
2_A 46_I 0.73 0.00
68_V 51_S 0.73 0.00
4_E 87_Y 0.73 0.00
29_G 80_R 0.72 0.00
64_K 92_N 0.72 0.00
69_F 177_F 0.72 0.00
64_K 191_N 0.71 0.00
33_T 138_D 0.71 0.00
72_R 39_L 0.70 0.00
25_E 197_L 0.70 0.00
33_T 50_F 0.70 0.00
52_K 212_N 0.69 0.00
69_F 38_L 0.69 0.00
43_N 151_T 0.68 0.00
63_S 62_D 0.68 0.00
46_R 150_G 0.67 0.00
40_M 74_I 0.67 0.00
72_R 7_S 0.67 0.00
71_S 207_Y 0.66 0.00
71_S 39_L 0.66 0.00
25_E 90_T 0.65 0.00
7_I 117_V 0.63 0.00
20_T 23_P 0.62 0.00
46_R 130_H 0.62 0.00
9_M 26_L 0.62 0.00
54_T 46_I 0.61 0.00
23_R 172_V 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.0479 seconds.