May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DUT - YICC
UniProt:
Length: 438
Sequences: 883
Seq/Len: 2.02
I_Prob: 0.16
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
147_H 7_A 1.37 0.16
42_L 238_V 1.30 0.13
110_I 80_L 1.10 0.07
147_H 71_D 1.07 0.07
98_I 283_I 0.99 0.05
114_E 152_L 0.97 0.05
42_L 96_K 0.95 0.04
69_P 213_D 0.94 0.04
138_T 50_R 0.94 0.04
142_E 76_G 0.93 0.04
88_I 25_R 0.90 0.04
137_A 62_V 0.85 0.03
98_I 128_A 0.84 0.03
40_V 53_I 0.84 0.03
38_D 93_N 0.83 0.03
69_P 203_Q 0.83 0.03
129_F 144_A 0.83 0.03
42_L 57_L 0.83 0.03
116_I 8_Y 0.81 0.03
147_H 159_R 0.80 0.03
98_I 26_S 0.80 0.03
8_I 286_I 0.77 0.02
122_V 211_R 0.75 0.02
55_A 25_R 0.74 0.02
100_V 81_N 0.74 0.02
147_H 180_W 0.74 0.02
42_L 74_A 0.73 0.02
128_E 135_D 0.73 0.02
50_V 57_L 0.73 0.02
42_L 48_V 0.73 0.02
117_A 205_L 0.72 0.02
4_I 270_I 0.72 0.02
27_S 32_L 0.72 0.02
84_L 107_V 0.71 0.02
65_A 160_L 0.71 0.02
104_G 49_V 0.70 0.02
147_H 212_I 0.70 0.02
121_F 49_V 0.70 0.02
106_D 109_I 0.70 0.02
63_L 156_I 0.69 0.02
67_M 36_F 0.69 0.02
57_H 256_L 0.69 0.02
38_D 132_A 0.69 0.02
27_S 121_Q 0.68 0.01
25_S 24_M 0.68 0.01
119_M 38_L 0.68 0.01
110_I 276_I 0.68 0.01
123_P 156_I 0.67 0.01
79_I 231_I 0.67 0.01
50_V 237_A 0.67 0.01
113_G 10_R 0.67 0.01
42_L 79_I 0.67 0.01
45_G 272_L 0.67 0.01
25_S 168_V 0.67 0.01
29_G 212_I 0.67 0.01
129_F 280_R 0.67 0.01
96_L 161_E 0.66 0.01
55_A 63_E 0.66 0.01
110_I 193_Q 0.66 0.01
6_V 260_S 0.66 0.01
143_G 122_D 0.65 0.01
125_V 276_I 0.65 0.01
50_V 172_S 0.65 0.01
95_Q 137_T 0.65 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.5468 seconds.