May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

TRUB - YHBQ
UniProt:
Length: 414
Sequences: 810
Seq/Len: 2.09
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
180_I 72_K 0.88 0.00
174_C 11_T 0.80 0.00
299_D 15_K 0.78 0.00
294_M 32_Q 0.77 0.00
259_T 62_R 0.77 0.00
54_M 40_L 0.76 0.00
51_A 8_L 0.72 0.00
129_L 61_L 0.72 0.00
303_V 23_D 0.72 0.00
196_H 20_I 0.71 0.00
68_Y 12_A 0.69 0.00
308_L 69_Q 0.69 0.00
134_K 53_P 0.68 0.00
135_K 4_W 0.68 0.00
228_Q 71_T 0.68 0.00
295_G 6_L 0.67 0.00
20_P 6_L 0.67 0.00
218_H 55_G 0.67 0.00
51_A 20_I 0.67 0.00
197_V 38_K 0.67 0.00
216_L 22_T 0.66 0.00
308_L 65_Y 0.65 0.00
158_L 78_L 0.64 0.00
134_K 28_Y 0.64 0.00
248_A 48_L 0.64 0.00
26_N 4_W 0.64 0.00
26_N 20_I 0.64 0.00
57_I 61_L 0.64 0.00
180_I 59_L 0.63 0.00
294_M 24_V 0.63 0.00
46_A 40_L 0.63 0.00
247_P 42_G 0.62 0.00
293_G 23_D 0.62 0.00
276_P 23_D 0.62 0.00
175_S 57_R 0.62 0.00
219_L 23_D 0.62 0.00
44_T 70_L 0.62 0.00
39_N 50_F 0.61 0.00
118_D 73_R 0.61 0.00
153_I 51_S 0.61 0.00
106_E 26_R 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.8513 seconds.