May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RNPA - YIDD
UniProt:
Length: 204
Sequences: 1123
Seq/Len: 6.07
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
63_N 65_H 0.81 0.00
100_A 58_V 0.78 0.00
113_C 61_V 0.75 0.00
11_R 25_P 0.74 0.00
70_R 30_H 0.73 0.00
37_G 75_V 0.72 0.00
12_L 43_E 0.71 0.00
66_K 65_H 0.68 0.00
108_L 72_D 0.68 0.00
31_P 26_L 0.67 0.00
29_G 16_I 0.67 0.00
59_A 68_H 0.67 0.00
24_Q 52_K 0.64 0.00
71_E 26_L 0.64 0.00
20_F 63_K 0.64 0.00
60_H 74_P 0.62 0.00
21_V 70_G 0.62 0.00
101_L 41_G 0.62 0.00
11_R 29_P 0.60 0.00
35_I 48_F 0.60 0.00
83_M 18_V 0.59 0.00
70_R 45_L 0.59 0.00
53_K 44_A 0.58 0.00
45_P 48_F 0.58 0.00
97_D 55_W 0.58 0.00
33_I 53_G 0.58 0.00
54_K 13_I 0.57 0.00
75_L 61_V 0.57 0.00
51_V 68_H 0.57 0.00
70_R 76_P 0.57 0.00
85_F 59_K 0.56 0.00
38_R 20_Q 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2877 seconds.