May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RIR1 - RIR4
UniProt:
Length: 1080
Sequences: 1075
Seq/Len: 1.02
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
626_S 36_V 1.47 0.01
515_I 96_F 1.20 0.01
566_P 222_A 1.11 0.01
736_D 303_S 1.04 0.00
397_E 119_D 0.99 0.00
529_K 152_I 0.99 0.00
200_V 96_F 0.99 0.00
606_I 270_L 0.98 0.00
129_K 36_V 0.97 0.00
193_V 59_V 0.95 0.00
215_V 211_S 0.94 0.00
356_F 223_F 0.89 0.00
209_T 244_T 0.89 0.00
345_T 53_Q 0.89 0.00
499_P 121_A 0.88 0.00
129_K 127_E 0.86 0.00
121_E 231_D 0.86 0.00
568_F 129_A 0.86 0.00
394_K 133_R 0.86 0.00
299_G 40_N 0.86 0.00
26_L 149_K 0.84 0.00
626_S 131_L 0.84 0.00
351_E 235_Q 0.83 0.00
481_L 117_D 0.83 0.00
133_T 216_E 0.83 0.00
690_D 131_L 0.83 0.00
349_K 51_V 0.82 0.00
367_A 203_Y 0.82 0.00
241_S 247_A 0.82 0.00
600_E 228_E 0.81 0.00
661_H 248_D 0.81 0.00
117_N 219_K 0.80 0.00
93_A 175_R 0.80 0.00
91_K 238_D 0.80 0.00
557_E 53_Q 0.80 0.00
739_E 291_D 0.80 0.00
144_S 167_W 0.79 0.00
350_G 39_S 0.79 0.00
513_L 139_Q 0.79 0.00
235_D 36_V 0.79 0.00
111_E 136_Q 0.78 0.00
386_D 216_E 0.78 0.00
443_A 172_F 0.78 0.00
313_V 212_L 0.78 0.00
450_N 152_I 0.78 0.00
569_N 152_I 0.78 0.00
37_S 39_S 0.77 0.00
509_G 53_Q 0.77 0.00
320_K 300_S 0.77 0.00
648_K 30_F 0.77 0.00
313_V 152_I 0.77 0.00
121_E 220_S 0.77 0.00
604_E 143_R 0.77 0.00
544_F 30_F 0.76 0.00
604_E 216_E 0.76 0.00
557_E 108_I 0.75 0.00
601_A 220_S 0.75 0.00
397_E 271_F 0.75 0.00
351_E 220_S 0.75 0.00
608_T 136_Q 0.75 0.00
357_S 118_V 0.74 0.00
532_S 131_L 0.74 0.00
27_D 136_Q 0.74 0.00
31_E 220_S 0.74 0.00
195_R 49_T 0.74 0.00
604_E 133_R 0.74 0.00
608_T 270_L 0.74 0.00
368_F 147_P 0.74 0.00
553_K 133_R 0.74 0.00
216_R 102_A 0.74 0.00
128_F 265_L 0.74 0.00
356_F 100_V 0.73 0.00
547_I 268_E 0.73 0.00
392_R 36_V 0.73 0.00
287_T 40_N 0.73 0.00
320_K 151_K 0.73 0.00
734_T 26_L 0.73 0.00
374_E 271_F 0.73 0.00
322_N 35_K 0.73 0.00
492_L 50_V 0.73 0.00
60_E 151_K 0.73 0.00
683_G 256_Y 0.73 0.00
133_T 313_E 0.73 0.00
608_T 152_I 0.73 0.00
135_I 146_D 0.72 0.00
557_E 220_S 0.72 0.00
453_N 271_F 0.72 0.00
426_F 7_S 0.72 0.00
117_N 228_E 0.72 0.00
320_K 303_S 0.72 0.00
726_V 153_A 0.72 0.00
129_K 220_S 0.72 0.00
712_Q 100_V 0.72 0.00
381_K 140_Q 0.72 0.00
558_L 220_S 0.72 0.00
485_A 283_L 0.72 0.00
111_E 133_R 0.72 0.00
458_E 13_K 0.71 0.00
608_T 227_L 0.71 0.00
609_H 220_S 0.71 0.00
6_L 11_W 0.71 0.00
349_K 209_K 0.71 0.00
60_E 238_D 0.71 0.00
564_A 224_D 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2005 seconds.