May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RIMP - YHBY
UniProt:
Length: 247
Sequences: 660
Seq/Len: 2.67
I_Prob: 0.52
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
136_F 13_G 1.43 0.52
122_G 24_L 1.35 0.44
16_V 12_K 1.28 0.39
81_L 8_K 1.26 0.37
35_T 44_H 1.16 0.28
30_R 6_K 1.09 0.23
38_I 51_I 1.07 0.22
67_P 28_G 1.03 0.19
82_D 28_G 1.02 0.18
47_N 30_T 0.95 0.14
77_S 40_A 0.94 0.14
4_L 92_K 0.93 0.13
11_M 85_Y 0.93 0.13
111_R 54_E 0.92 0.13
24_V 96_P 0.92 0.13
13_T 29_L 0.92 0.13
102_V 9_Q 0.90 0.12
71_A 43_H 0.89 0.11
94_F 91_R 0.89 0.11
115_G 7_Q 0.89 0.11
39_Y 30_T 0.87 0.11
81_L 12_K 0.87 0.11
107_V 43_H 0.87 0.11
41_D 76_Q 0.86 0.10
56_H 13_G 0.85 0.10
122_G 18_L 0.85 0.10
148_P 49_V 0.84 0.09
73_N 3_L 0.83 0.09
67_P 36_E 0.82 0.09
97_E 27_N 0.82 0.09
52_A 65_A 0.82 0.09
24_V 85_Y 0.81 0.08
64_V 44_H 0.81 0.08
24_V 58_T 0.80 0.08
145_N 31_E 0.80 0.08
103_L 34_L 0.80 0.08
138_L 44_H 0.79 0.08
72_Y 85_Y 0.79 0.08
141_I 67_V 0.78 0.07
63_D 45_E 0.78 0.07
33_T 12_K 0.77 0.07
84_P 20_P 0.77 0.07
47_N 91_R 0.76 0.07
48_V 5_T 0.76 0.07
109_N 12_K 0.76 0.07
94_F 8_K 0.75 0.06
84_P 87_P 0.74 0.06
13_T 84_L 0.73 0.06
46_I 40_A 0.73 0.06
107_V 11_L 0.73 0.06
144_A 16_H 0.73 0.06
63_D 85_Y 0.72 0.06
99_V 73_C 0.72 0.06
120_V 16_H 0.72 0.06
29_I 6_K 0.72 0.06
25_G 43_H 0.72 0.05
24_V 16_H 0.71 0.05
113_W 80_K 0.71 0.05
91_Y 29_L 0.71 0.05
21_F 67_V 0.71 0.05
106_A 23_L 0.71 0.05
111_R 25_G 0.71 0.05
127_V 67_V 0.71 0.05
145_N 15_A 0.71 0.05
81_L 71_G 0.70 0.05
16_V 27_N 0.70 0.05
107_V 66_I 0.70 0.05
146_L 21_V 0.70 0.05
73_N 75_V 0.70 0.05
40_I 51_I 0.69 0.05
26_I 70_T 0.69 0.05
17_E 47_I 0.69 0.05
133_D 64_E 0.69 0.05
114_Q 50_K 0.69 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.7471 seconds.